Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Prpf31Q8CCF0 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC18.04■□□□□ 0.48
Prpf31Q8CCF0 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Prpf31Q8CCF0 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Prpf31Q8CCF0 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Prpf31Q8CCF0 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Prpf31Q8CCF0 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Prpf31Q8CCF0 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC18.04■□□□□ 0.48
Prpf31Q8CCF0 Gm17971-201ENSMUST00000190239 806 ntBASIC18.04■□□□□ 0.48
Prpf31Q8CCF0 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC18.04■□□□□ 0.48
Prpf31Q8CCF0 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC18.04■□□□□ 0.48
Prpf31Q8CCF0 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Prpf31Q8CCF0 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
Prpf31Q8CCF0 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Prpf31Q8CCF0 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Prpf31Q8CCF0 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC18.04■□□□□ 0.48
Prpf31Q8CCF0 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Prpf31Q8CCF0 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Prpf31Q8CCF0 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Prpf31Q8CCF0 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
Prpf31Q8CCF0 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Prpf31Q8CCF0 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Prpf31Q8CCF0 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Prpf31Q8CCF0 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Prpf31Q8CCF0 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Prpf31Q8CCF0 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC18.03■□□□□ 0.48
Prpf31Q8CCF0 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Prpf31Q8CCF0 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC18.03■□□□□ 0.48
Prpf31Q8CCF0 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Prpf31Q8CCF0 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Prpf31Q8CCF0 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Prpf31Q8CCF0 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Prpf31Q8CCF0 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC18.03■□□□□ 0.48
Prpf31Q8CCF0 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Prpf31Q8CCF0 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Prpf31Q8CCF0 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Prpf31Q8CCF0 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Prpf31Q8CCF0 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Prpf31Q8CCF0 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Prpf31Q8CCF0 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Prpf31Q8CCF0 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Prpf31Q8CCF0 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Prpf31Q8CCF0 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Prpf31Q8CCF0 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC18.02■□□□□ 0.48
Prpf31Q8CCF0 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
Prpf31Q8CCF0 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Prpf31Q8CCF0 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC18.02■□□□□ 0.48
Prpf31Q8CCF0 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
Prpf31Q8CCF0 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Prpf31Q8CCF0 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Prpf31Q8CCF0 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Prpf31Q8CCF0 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
Prpf31Q8CCF0 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
Prpf31Q8CCF0 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
Prpf31Q8CCF0 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Prpf31Q8CCF0 Gm11841-201ENSMUST00000117060 1963 ntBASIC18.02■□□□□ 0.47
Prpf31Q8CCF0 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Prpf31Q8CCF0 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Prpf31Q8CCF0 Gm43548-201ENSMUST00000197139 2353 ntBASIC18.02■□□□□ 0.47
Prpf31Q8CCF0 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
Prpf31Q8CCF0 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Prpf31Q8CCF0 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Prpf31Q8CCF0 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Prpf31Q8CCF0 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Prpf31Q8CCF0 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Prpf31Q8CCF0 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Prpf31Q8CCF0 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Prpf31Q8CCF0 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
Prpf31Q8CCF0 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Prpf31Q8CCF0 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Prpf31Q8CCF0 Gm15442-201ENSMUST00000117905 1527 ntBASIC18.01■□□□□ 0.47
Prpf31Q8CCF0 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Prpf31Q8CCF0 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Prpf31Q8CCF0 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Prpf31Q8CCF0 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Prpf31Q8CCF0 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Prpf31Q8CCF0 Gm16401-202ENSMUST00000197463 2074 ntBASIC18■□□□□ 0.47
Prpf31Q8CCF0 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Prpf31Q8CCF0 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC18■□□□□ 0.47
Prpf31Q8CCF0 Gm27741-201ENSMUST00000185060 237 ntBASIC18■□□□□ 0.47
Prpf31Q8CCF0 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC18■□□□□ 0.47
Prpf31Q8CCF0 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Prpf31Q8CCF0 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Prpf31Q8CCF0 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Prpf31Q8CCF0 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Prpf31Q8CCF0 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Prpf31Q8CCF0 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Prpf31Q8CCF0 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Prpf31Q8CCF0 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Prpf31Q8CCF0 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Prpf31Q8CCF0 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Prpf31Q8CCF0 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC18■□□□□ 0.47
Prpf31Q8CCF0 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Prpf31Q8CCF0 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Prpf31Q8CCF0 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Prpf31Q8CCF0 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Prpf31Q8CCF0 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Prpf31Q8CCF0 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Prpf31Q8CCF0 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17.99■□□□□ 0.47
Prpf31Q8CCF0 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms