Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Lysmd4Q8CC84 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Lysmd4Q8CC84 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Lysmd4Q8CC84 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Lysmd4Q8CC84 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Lysmd4Q8CC84 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC14.83□□□□□ -0.04
Lysmd4Q8CC84 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC14.83□□□□□ -0.04
Lysmd4Q8CC84 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC14.83□□□□□ -0.04
Lysmd4Q8CC84 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Lysmd4Q8CC84 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC14.83□□□□□ -0.04
Lysmd4Q8CC84 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Lysmd4Q8CC84 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Lysmd4Q8CC84 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Lysmd4Q8CC84 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Lysmd4Q8CC84 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Lysmd4Q8CC84 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Lysmd4Q8CC84 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Lysmd4Q8CC84 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Lysmd4Q8CC84 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
Lysmd4Q8CC84 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Lysmd4Q8CC84 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lysmd4Q8CC84 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lysmd4Q8CC84 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Lysmd4Q8CC84 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lysmd4Q8CC84 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
Lysmd4Q8CC84 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lysmd4Q8CC84 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Lysmd4Q8CC84 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lysmd4Q8CC84 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Lysmd4Q8CC84 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Lysmd4Q8CC84 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Lysmd4Q8CC84 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Lysmd4Q8CC84 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lysmd4Q8CC84 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC14.82□□□□□ -0.04
Lysmd4Q8CC84 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC14.82□□□□□ -0.04
Lysmd4Q8CC84 Gm43183-201ENSMUST00000200632 547 ntBASIC14.82□□□□□ -0.04
Lysmd4Q8CC84 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lysmd4Q8CC84 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lysmd4Q8CC84 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lysmd4Q8CC84 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lysmd4Q8CC84 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lysmd4Q8CC84 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lysmd4Q8CC84 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lysmd4Q8CC84 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lysmd4Q8CC84 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Lysmd4Q8CC84 Wnt10b-204ENSMUST00000226655 1807 ntBASIC14.82□□□□□ -0.04
Lysmd4Q8CC84 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lysmd4Q8CC84 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lysmd4Q8CC84 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lysmd4Q8CC84 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lysmd4Q8CC84 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lysmd4Q8CC84 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Lysmd4Q8CC84 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lysmd4Q8CC84 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lysmd4Q8CC84 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC14.81□□□□□ -0.04
Lysmd4Q8CC84 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lysmd4Q8CC84 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lysmd4Q8CC84 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lysmd4Q8CC84 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Lysmd4Q8CC84 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC14.81□□□□□ -0.04
Lysmd4Q8CC84 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC14.81□□□□□ -0.04
Lysmd4Q8CC84 Gm27275-201ENSMUST00000184318 272 ntBASIC14.81□□□□□ -0.04
Lysmd4Q8CC84 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC14.81□□□□□ -0.04
Lysmd4Q8CC84 Gm18666-201ENSMUST00000190039 958 ntBASIC14.81□□□□□ -0.04
Lysmd4Q8CC84 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lysmd4Q8CC84 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
Lysmd4Q8CC84 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lysmd4Q8CC84 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lysmd4Q8CC84 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lysmd4Q8CC84 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lysmd4Q8CC84 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC14.81□□□□□ -0.04
Lysmd4Q8CC84 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lysmd4Q8CC84 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lysmd4Q8CC84 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Lysmd4Q8CC84 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lysmd4Q8CC84 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Lysmd4Q8CC84 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lysmd4Q8CC84 Ccdc166-201ENSMUST00000182172 2584 ntBASIC14.8□□□□□ -0.04
Lysmd4Q8CC84 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lysmd4Q8CC84 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lysmd4Q8CC84 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lysmd4Q8CC84 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lysmd4Q8CC84 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Lysmd4Q8CC84 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lysmd4Q8CC84 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lysmd4Q8CC84 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Lysmd4Q8CC84 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Lysmd4Q8CC84 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lysmd4Q8CC84 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lysmd4Q8CC84 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lysmd4Q8CC84 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lysmd4Q8CC84 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lysmd4Q8CC84 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lysmd4Q8CC84 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lysmd4Q8CC84 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lysmd4Q8CC84 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lysmd4Q8CC84 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lysmd4Q8CC84 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Lysmd4Q8CC84 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lysmd4Q8CC84 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms