Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trim9Q8C7M3 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trim9Q8C7M3 Gm18101-201ENSMUST00000215769 548 ntBASIC18.22■□□□□ 0.51
Trim9Q8C7M3 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim9Q8C7M3 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim9Q8C7M3 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trim9Q8C7M3 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Trim9Q8C7M3 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim9Q8C7M3 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim9Q8C7M3 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim9Q8C7M3 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.22■□□□□ 0.51
Trim9Q8C7M3 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim9Q8C7M3 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim9Q8C7M3 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC18.21■□□□□ 0.51
Trim9Q8C7M3 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim9Q8C7M3 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trim9Q8C7M3 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Trim9Q8C7M3 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim9Q8C7M3 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Trim9Q8C7M3 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Trim9Q8C7M3 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Trim9Q8C7M3 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Trim9Q8C7M3 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim9Q8C7M3 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC18.21■□□□□ 0.51
Trim9Q8C7M3 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC18.21■□□□□ 0.51
Trim9Q8C7M3 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim9Q8C7M3 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC18.21■□□□□ 0.51
Trim9Q8C7M3 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Trim9Q8C7M3 Gm10231-201ENSMUST00000181584 441 ntBASIC18.21■□□□□ 0.51
Trim9Q8C7M3 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim9Q8C7M3 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Trim9Q8C7M3 Gm37722-201ENSMUST00000193757 208 ntBASIC18.21■□□□□ 0.51
Trim9Q8C7M3 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim9Q8C7M3 Gm10175-202ENSMUST00000208752 441 ntBASIC18.21■□□□□ 0.51
Trim9Q8C7M3 AC122351.1-201ENSMUST00000220467 126 ntBASIC18.21■□□□□ 0.51
Trim9Q8C7M3 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim9Q8C7M3 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim9Q8C7M3 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Trim9Q8C7M3 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim9Q8C7M3 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim9Q8C7M3 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim9Q8C7M3 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim9Q8C7M3 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim9Q8C7M3 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.5
Trim9Q8C7M3 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trim9Q8C7M3 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim9Q8C7M3 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trim9Q8C7M3 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim9Q8C7M3 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim9Q8C7M3 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Trim9Q8C7M3 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Trim9Q8C7M3 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim9Q8C7M3 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim9Q8C7M3 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC18.2■□□□□ 0.5
Trim9Q8C7M3 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Trim9Q8C7M3 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trim9Q8C7M3 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Trim9Q8C7M3 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Trim9Q8C7M3 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Trim9Q8C7M3 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim9Q8C7M3 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim9Q8C7M3 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim9Q8C7M3 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim9Q8C7M3 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trim9Q8C7M3 AC115863.1-201ENSMUST00000214815 1813 ntBASIC18.2■□□□□ 0.5
Trim9Q8C7M3 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trim9Q8C7M3 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim9Q8C7M3 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trim9Q8C7M3 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim9Q8C7M3 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim9Q8C7M3 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim9Q8C7M3 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim9Q8C7M3 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trim9Q8C7M3 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC18.19■□□□□ 0.5
Trim9Q8C7M3 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC18.19■□□□□ 0.5
Trim9Q8C7M3 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC18.19■□□□□ 0.5
Trim9Q8C7M3 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC18.19■□□□□ 0.5
Trim9Q8C7M3 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim9Q8C7M3 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC18.19■□□□□ 0.5
Trim9Q8C7M3 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim9Q8C7M3 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim9Q8C7M3 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim9Q8C7M3 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim9Q8C7M3 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trim9Q8C7M3 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim9Q8C7M3 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim9Q8C7M3 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim9Q8C7M3 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim9Q8C7M3 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trim9Q8C7M3 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim9Q8C7M3 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim9Q8C7M3 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim9Q8C7M3 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim9Q8C7M3 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim9Q8C7M3 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim9Q8C7M3 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Trim9Q8C7M3 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Trim9Q8C7M3 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trim9Q8C7M3 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC18.18■□□□□ 0.5
Trim9Q8C7M3 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms