Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC14.85□□□□□ -0.03
Col6a6Q8C6K9 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Col6a6Q8C6K9 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col6a6Q8C6K9 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col6a6Q8C6K9 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col6a6Q8C6K9 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col6a6Q8C6K9 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col6a6Q8C6K9 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col6a6Q8C6K9 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col6a6Q8C6K9 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col6a6Q8C6K9 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col6a6Q8C6K9 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Col6a6Q8C6K9 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col6a6Q8C6K9 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col6a6Q8C6K9 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Col6a6Q8C6K9 Gm6184-201ENSMUST00000120403 1261 ntBASIC14.84□□□□□ -0.03
Col6a6Q8C6K9 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC14.84□□□□□ -0.03
Col6a6Q8C6K9 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Col6a6Q8C6K9 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col6a6Q8C6K9 AC114585.2-202ENSMUST00000228094 426 ntBASIC14.84□□□□□ -0.03
Col6a6Q8C6K9 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col6a6Q8C6K9 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col6a6Q8C6K9 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col6a6Q8C6K9 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col6a6Q8C6K9 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col6a6Q8C6K9 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Col6a6Q8C6K9 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col6a6Q8C6K9 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col6a6Q8C6K9 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col6a6Q8C6K9 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col6a6Q8C6K9 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col6a6Q8C6K9 Gm8349-201ENSMUST00000182720 1003 ntBASIC14.83□□□□□ -0.03
Col6a6Q8C6K9 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Col6a6Q8C6K9 Ndufaf2-202ENSMUST00000223734 556 ntBASIC14.83□□□□□ -0.03
Col6a6Q8C6K9 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Col6a6Q8C6K9 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC14.83□□□□□ -0.03
Col6a6Q8C6K9 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
Col6a6Q8C6K9 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Col6a6Q8C6K9 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Col6a6Q8C6K9 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Col6a6Q8C6K9 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC14.83□□□□□ -0.04
Col6a6Q8C6K9 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col6a6Q8C6K9 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col6a6Q8C6K9 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col6a6Q8C6K9 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col6a6Q8C6K9 Dmtn-207ENSMUST00000228001 2437 ntBASIC14.83□□□□□ -0.04
Col6a6Q8C6K9 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col6a6Q8C6K9 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col6a6Q8C6K9 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Col6a6Q8C6K9 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col6a6Q8C6K9 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col6a6Q8C6K9 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Col6a6Q8C6K9 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col6a6Q8C6K9 H2af-ps-201ENSMUST00000119066 295 ntBASIC14.82□□□□□ -0.04
Col6a6Q8C6K9 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC14.82□□□□□ -0.04
Col6a6Q8C6K9 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Col6a6Q8C6K9 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC14.82□□□□□ -0.04
Col6a6Q8C6K9 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col6a6Q8C6K9 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col6a6Q8C6K9 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
Col6a6Q8C6K9 Gm9889-202ENSMUST00000206983 1577 ntBASIC14.82□□□□□ -0.04
Col6a6Q8C6K9 Gm43808-201ENSMUST00000202534 2065 ntBASIC14.82□□□□□ -0.04
Col6a6Q8C6K9 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col6a6Q8C6K9 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col6a6Q8C6K9 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Col6a6Q8C6K9 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col6a6Q8C6K9 Gm6089-201ENSMUST00000197666 938 ntBASIC14.82□□□□□ -0.04
Col6a6Q8C6K9 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Col6a6Q8C6K9 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col6a6Q8C6K9 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Col6a6Q8C6K9 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Col6a6Q8C6K9 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col6a6Q8C6K9 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC14.82□□□□□ -0.04
Col6a6Q8C6K9 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Col6a6Q8C6K9 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col6a6Q8C6K9 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col6a6Q8C6K9 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col6a6Q8C6K9 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col6a6Q8C6K9 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col6a6Q8C6K9 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col6a6Q8C6K9 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col6a6Q8C6K9 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Col6a6Q8C6K9 Bloc1s5-203ENSMUST00000224902 612 ntBASIC14.81□□□□□ -0.04
Col6a6Q8C6K9 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col6a6Q8C6K9 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Col6a6Q8C6K9 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col6a6Q8C6K9 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col6a6Q8C6K9 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC14.81□□□□□ -0.04
Col6a6Q8C6K9 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Col6a6Q8C6K9 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col6a6Q8C6K9 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Col6a6Q8C6K9 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC14.81□□□□□ -0.04
Col6a6Q8C6K9 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col6a6Q8C6K9 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col6a6Q8C6K9 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col6a6Q8C6K9 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col6a6Q8C6K9 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col6a6Q8C6K9 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col6a6Q8C6K9 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col6a6Q8C6K9 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms