Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC13.87□□□□□ -0.19
Tsen54Q8C2A2 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Tsen54Q8C2A2 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Tsen54Q8C2A2 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC13.87□□□□□ -0.19
Tsen54Q8C2A2 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC13.87□□□□□ -0.19
Tsen54Q8C2A2 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Tsen54Q8C2A2 Flg-201ENSMUST00000050758 1488 ntBASIC13.87□□□□□ -0.19
Tsen54Q8C2A2 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Tsen54Q8C2A2 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Tsen54Q8C2A2 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Tsen54Q8C2A2 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Tsen54Q8C2A2 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Tsen54Q8C2A2 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Tsen54Q8C2A2 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Tsen54Q8C2A2 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Tsen54Q8C2A2 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Tsen54Q8C2A2 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Tsen54Q8C2A2 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Tsen54Q8C2A2 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Tsen54Q8C2A2 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Tsen54Q8C2A2 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Tsen54Q8C2A2 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC13.86□□□□□ -0.19
Tsen54Q8C2A2 Gm20760-201ENSMUST00000179197 648 ntBASIC13.86□□□□□ -0.19
Tsen54Q8C2A2 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Tsen54Q8C2A2 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Tsen54Q8C2A2 Gm43272-201ENSMUST00000200599 1584 ntBASIC13.86□□□□□ -0.19
Tsen54Q8C2A2 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Tsen54Q8C2A2 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
Tsen54Q8C2A2 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC13.86□□□□□ -0.19
Tsen54Q8C2A2 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Tsen54Q8C2A2 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Tsen54Q8C2A2 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Tsen54Q8C2A2 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Tsen54Q8C2A2 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
Tsen54Q8C2A2 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC13.86□□□□□ -0.19
Tsen54Q8C2A2 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC13.86□□□□□ -0.19
Tsen54Q8C2A2 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Tsen54Q8C2A2 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Tsen54Q8C2A2 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Tsen54Q8C2A2 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Tsen54Q8C2A2 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Tsen54Q8C2A2 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Tsen54Q8C2A2 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Tsen54Q8C2A2 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Tsen54Q8C2A2 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Tsen54Q8C2A2 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Tsen54Q8C2A2 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Tsen54Q8C2A2 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Tsen54Q8C2A2 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Tsen54Q8C2A2 Gm15847-201ENSMUST00000121417 1065 ntBASIC13.85□□□□□ -0.19
Tsen54Q8C2A2 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Tsen54Q8C2A2 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC13.85□□□□□ -0.19
Tsen54Q8C2A2 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC13.85□□□□□ -0.19
Tsen54Q8C2A2 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC13.85□□□□□ -0.19
Tsen54Q8C2A2 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Tsen54Q8C2A2 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC13.85□□□□□ -0.19
Tsen54Q8C2A2 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Tsen54Q8C2A2 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Tsen54Q8C2A2 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Tsen54Q8C2A2 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC13.85□□□□□ -0.19
Tsen54Q8C2A2 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Tsen54Q8C2A2 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Tsen54Q8C2A2 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Tsen54Q8C2A2 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Tsen54Q8C2A2 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Tsen54Q8C2A2 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Tsen54Q8C2A2 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Tsen54Q8C2A2 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
Tsen54Q8C2A2 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Tsen54Q8C2A2 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Tsen54Q8C2A2 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Tsen54Q8C2A2 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Tsen54Q8C2A2 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tsen54Q8C2A2 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tsen54Q8C2A2 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tsen54Q8C2A2 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Tsen54Q8C2A2 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Tsen54Q8C2A2 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Tsen54Q8C2A2 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tsen54Q8C2A2 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Tsen54Q8C2A2 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Tsen54Q8C2A2 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Tsen54Q8C2A2 Gm37856-201ENSMUST00000191634 999 ntBASIC13.84□□□□□ -0.19
Tsen54Q8C2A2 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Tsen54Q8C2A2 Wnt10b-205ENSMUST00000226846 1204 ntBASIC13.84□□□□□ -0.19
Tsen54Q8C2A2 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tsen54Q8C2A2 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC13.84□□□□□ -0.19
Tsen54Q8C2A2 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tsen54Q8C2A2 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tsen54Q8C2A2 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Tsen54Q8C2A2 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tsen54Q8C2A2 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tsen54Q8C2A2 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Tsen54Q8C2A2 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC13.84□□□□□ -0.19
Tsen54Q8C2A2 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Tsen54Q8C2A2 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Tsen54Q8C2A2 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
Tsen54Q8C2A2 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.19
Tsen54Q8C2A2 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC13.83□□□□□ -0.19
Tsen54Q8C2A2 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms