Protein–RNA interactions for Protein: Q8C263

Ska3, Spindle and kinetochore-associated protein 3, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska3Q8C263 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ska3Q8C263 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ska3Q8C263 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ska3Q8C263 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ska3Q8C263 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ska3Q8C263 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC15.53■□□□□ 0.08
Ska3Q8C263 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ska3Q8C263 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ska3Q8C263 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Ska3Q8C263 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Ska3Q8C263 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ska3Q8C263 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Ska3Q8C263 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Ska3Q8C263 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ska3Q8C263 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC15.52■□□□□ 0.08
Ska3Q8C263 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
Ska3Q8C263 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ska3Q8C263 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
Ska3Q8C263 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ska3Q8C263 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Ska3Q8C263 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC15.52■□□□□ 0.08
Ska3Q8C263 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ska3Q8C263 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ska3Q8C263 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ska3Q8C263 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ska3Q8C263 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ska3Q8C263 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ska3Q8C263 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ska3Q8C263 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ska3Q8C263 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Ska3Q8C263 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ska3Q8C263 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ska3Q8C263 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ska3Q8C263 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ska3Q8C263 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC15.51■□□□□ 0.07
Ska3Q8C263 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ska3Q8C263 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC15.51■□□□□ 0.07
Ska3Q8C263 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ska3Q8C263 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ska3Q8C263 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
Ska3Q8C263 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC15.51■□□□□ 0.07
Ska3Q8C263 Gm9013-201ENSMUST00000132939 882 ntBASIC15.51■□□□□ 0.07
Ska3Q8C263 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ska3Q8C263 Gm44450-201ENSMUST00000199528 114 ntBASIC15.51■□□□□ 0.07
Ska3Q8C263 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ska3Q8C263 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ska3Q8C263 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ska3Q8C263 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ska3Q8C263 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC15.51■□□□□ 0.07
Ska3Q8C263 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Ska3Q8C263 Gm45203-201ENSMUST00000206384 1831 ntBASIC15.51■□□□□ 0.07
Ska3Q8C263 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ska3Q8C263 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Ska3Q8C263 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ska3Q8C263 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ska3Q8C263 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Ska3Q8C263 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC15.5■□□□□ 0.07
Ska3Q8C263 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Ska3Q8C263 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ska3Q8C263 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
Ska3Q8C263 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ska3Q8C263 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ska3Q8C263 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ska3Q8C263 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Ska3Q8C263 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ska3Q8C263 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Ska3Q8C263 Gm37722-201ENSMUST00000193757 208 ntBASIC15.5■□□□□ 0.07
Ska3Q8C263 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Ska3Q8C263 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ska3Q8C263 Gm26917-202ENSMUST00000192833 3329 ntBASIC15.5■□□□□ 0.07
Ska3Q8C263 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ska3Q8C263 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ska3Q8C263 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ska3Q8C263 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
Ska3Q8C263 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ska3Q8C263 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ska3Q8C263 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ska3Q8C263 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Ska3Q8C263 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ska3Q8C263 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC15.5■□□□□ 0.07
Ska3Q8C263 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ska3Q8C263 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC15.49■□□□□ 0.07
Ska3Q8C263 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Ska3Q8C263 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ska3Q8C263 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ska3Q8C263 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ska3Q8C263 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Ska3Q8C263 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ska3Q8C263 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC15.49■□□□□ 0.07
Ska3Q8C263 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ska3Q8C263 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ska3Q8C263 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ska3Q8C263 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Ska3Q8C263 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Ska3Q8C263 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC15.49■□□□□ 0.07
Ska3Q8C263 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Ska3Q8C263 Gfra2-202ENSMUST00000227633 1480 ntBASIC15.49■□□□□ 0.07
Ska3Q8C263 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC15.49■□□□□ 0.07
Ska3Q8C263 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC15.49■□□□□ 0.07
Ska3Q8C263 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC15.49■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms