Protein–RNA interactions for Protein: Q8BY89

Slc44a2, Choline transporter-like protein 2, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc44a2Q8BY89 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Slc44a2Q8BY89 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.16
Slc44a2Q8BY89 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Slc44a2Q8BY89 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Slc44a2Q8BY89 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Slc44a2Q8BY89 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Slc44a2Q8BY89 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Slc44a2Q8BY89 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Slc44a2Q8BY89 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Slc44a2Q8BY89 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Slc44a2Q8BY89 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Slc44a2Q8BY89 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Slc44a2Q8BY89 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Slc44a2Q8BY89 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Slc44a2Q8BY89 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Slc44a2Q8BY89 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Slc44a2Q8BY89 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Slc44a2Q8BY89 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC16.07■□□□□ 0.16
Slc44a2Q8BY89 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC16.07■□□□□ 0.16
Slc44a2Q8BY89 Gm15378-201ENSMUST00000121894 207 ntBASIC16.07■□□□□ 0.16
Slc44a2Q8BY89 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Slc44a2Q8BY89 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC16.07■□□□□ 0.16
Slc44a2Q8BY89 Gm5297-201ENSMUST00000198555 1171 ntBASIC16.07■□□□□ 0.16
Slc44a2Q8BY89 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC16.07■□□□□ 0.16
Slc44a2Q8BY89 AC112142.1-201ENSMUST00000228796 918 ntBASIC16.07■□□□□ 0.16
Slc44a2Q8BY89 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Slc44a2Q8BY89 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC16.07■□□□□ 0.16
Slc44a2Q8BY89 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
Slc44a2Q8BY89 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Slc44a2Q8BY89 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Slc44a2Q8BY89 Gm43072-201ENSMUST00000200283 1671 ntBASIC16.07■□□□□ 0.16
Slc44a2Q8BY89 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Slc44a2Q8BY89 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Slc44a2Q8BY89 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
Slc44a2Q8BY89 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Slc44a2Q8BY89 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC16.07■□□□□ 0.16
Slc44a2Q8BY89 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Slc44a2Q8BY89 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Slc44a2Q8BY89 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Slc44a2Q8BY89 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Slc44a2Q8BY89 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Slc44a2Q8BY89 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Slc44a2Q8BY89 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Slc44a2Q8BY89 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Slc44a2Q8BY89 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Slc44a2Q8BY89 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Slc44a2Q8BY89 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Slc44a2Q8BY89 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
Slc44a2Q8BY89 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Slc44a2Q8BY89 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Slc44a2Q8BY89 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Slc44a2Q8BY89 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Slc44a2Q8BY89 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Slc44a2Q8BY89 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC16.06■□□□□ 0.16
Slc44a2Q8BY89 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC16.06■□□□□ 0.16
Slc44a2Q8BY89 AC166341.7-201ENSMUST00000221698 126 ntBASIC16.06■□□□□ 0.16
Slc44a2Q8BY89 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Slc44a2Q8BY89 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC16.06■□□□□ 0.16
Slc44a2Q8BY89 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Slc44a2Q8BY89 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC16.06■□□□□ 0.16
Slc44a2Q8BY89 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
Slc44a2Q8BY89 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Slc44a2Q8BY89 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Slc44a2Q8BY89 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Slc44a2Q8BY89 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Slc44a2Q8BY89 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Slc44a2Q8BY89 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC16.06■□□□□ 0.16
Slc44a2Q8BY89 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Slc44a2Q8BY89 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Slc44a2Q8BY89 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Slc44a2Q8BY89 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Slc44a2Q8BY89 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Slc44a2Q8BY89 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Slc44a2Q8BY89 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Slc44a2Q8BY89 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Slc44a2Q8BY89 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Slc44a2Q8BY89 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Slc44a2Q8BY89 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Slc44a2Q8BY89 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Slc44a2Q8BY89 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC16.05■□□□□ 0.16
Slc44a2Q8BY89 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Slc44a2Q8BY89 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Slc44a2Q8BY89 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
Slc44a2Q8BY89 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Slc44a2Q8BY89 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Slc44a2Q8BY89 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Slc44a2Q8BY89 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Slc44a2Q8BY89 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Slc44a2Q8BY89 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Slc44a2Q8BY89 AC133083.1-201ENSMUST00000221736 2209 ntBASIC16.04■□□□□ 0.16
Slc44a2Q8BY89 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Slc44a2Q8BY89 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Slc44a2Q8BY89 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC16.04■□□□□ 0.16
Slc44a2Q8BY89 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Slc44a2Q8BY89 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Slc44a2Q8BY89 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Slc44a2Q8BY89 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC16.04■□□□□ 0.16
Slc44a2Q8BY89 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Slc44a2Q8BY89 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Slc44a2Q8BY89 Gm6576-201ENSMUST00000169678 883 ntBASIC16.04■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms