Protein–RNA interactions for Protein: Q8BUP8

Fam43a, Protein FAM43A, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam43aQ8BUP8 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Fam43aQ8BUP8 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
Fam43aQ8BUP8 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC18.42■□□□□ 0.54
Fam43aQ8BUP8 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Fam43aQ8BUP8 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC18.42■□□□□ 0.54
Fam43aQ8BUP8 Gm13181-201ENSMUST00000120117 1069 ntBASIC18.42■□□□□ 0.54
Fam43aQ8BUP8 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Fam43aQ8BUP8 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Fam43aQ8BUP8 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Fam43aQ8BUP8 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Fam43aQ8BUP8 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Fam43aQ8BUP8 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Fam43aQ8BUP8 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Fam43aQ8BUP8 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Fam43aQ8BUP8 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Fam43aQ8BUP8 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Fam43aQ8BUP8 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Fam43aQ8BUP8 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Fam43aQ8BUP8 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Fam43aQ8BUP8 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Fam43aQ8BUP8 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Fam43aQ8BUP8 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Fam43aQ8BUP8 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Fam43aQ8BUP8 Gm11643-201ENSMUST00000119578 864 ntBASIC18.41■□□□□ 0.54
Fam43aQ8BUP8 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC18.41■□□□□ 0.54
Fam43aQ8BUP8 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Fam43aQ8BUP8 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Fam43aQ8BUP8 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Fam43aQ8BUP8 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Fam43aQ8BUP8 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Fam43aQ8BUP8 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Fam43aQ8BUP8 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Fam43aQ8BUP8 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Fam43aQ8BUP8 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Fam43aQ8BUP8 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Fam43aQ8BUP8 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Fam43aQ8BUP8 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Fam43aQ8BUP8 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Fam43aQ8BUP8 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Fam43aQ8BUP8 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Fam43aQ8BUP8 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Fam43aQ8BUP8 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Fam43aQ8BUP8 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Fam43aQ8BUP8 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Fam43aQ8BUP8 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Fam43aQ8BUP8 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC18.4■□□□□ 0.54
Fam43aQ8BUP8 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Fam43aQ8BUP8 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Fam43aQ8BUP8 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Fam43aQ8BUP8 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Fam43aQ8BUP8 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC18.4■□□□□ 0.54
Fam43aQ8BUP8 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC18.4■□□□□ 0.54
Fam43aQ8BUP8 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Fam43aQ8BUP8 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Fam43aQ8BUP8 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Fam43aQ8BUP8 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Fam43aQ8BUP8 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC18.4■□□□□ 0.54
Fam43aQ8BUP8 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Fam43aQ8BUP8 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Fam43aQ8BUP8 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC18.39■□□□□ 0.54
Fam43aQ8BUP8 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Fam43aQ8BUP8 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Fam43aQ8BUP8 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Fam43aQ8BUP8 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Fam43aQ8BUP8 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Fam43aQ8BUP8 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC18.39■□□□□ 0.53
Fam43aQ8BUP8 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Fam43aQ8BUP8 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC18.39■□□□□ 0.53
Fam43aQ8BUP8 AC154649.1-201ENSMUST00000227392 384 ntBASIC18.39■□□□□ 0.53
Fam43aQ8BUP8 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Fam43aQ8BUP8 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Fam43aQ8BUP8 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Fam43aQ8BUP8 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Fam43aQ8BUP8 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Fam43aQ8BUP8 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Fam43aQ8BUP8 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Fam43aQ8BUP8 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Fam43aQ8BUP8 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC18.39■□□□□ 0.53
Fam43aQ8BUP8 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Fam43aQ8BUP8 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Fam43aQ8BUP8 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Fam43aQ8BUP8 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Fam43aQ8BUP8 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
Fam43aQ8BUP8 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Fam43aQ8BUP8 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Fam43aQ8BUP8 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Fam43aQ8BUP8 Gm10418-201ENSMUST00000100943 576 ntBASIC18.38■□□□□ 0.53
Fam43aQ8BUP8 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Fam43aQ8BUP8 AC175538.1-201ENSMUST00000225343 1269 ntBASIC18.38■□□□□ 0.53
Fam43aQ8BUP8 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Fam43aQ8BUP8 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Fam43aQ8BUP8 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Fam43aQ8BUP8 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Fam43aQ8BUP8 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC18.38■□□□□ 0.53
Fam43aQ8BUP8 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Fam43aQ8BUP8 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Fam43aQ8BUP8 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Fam43aQ8BUP8 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Fam43aQ8BUP8 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC18.38■□□□□ 0.53
Fam43aQ8BUP8 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms