Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Gm20628-201ENSMUST00000177363 3215 ntBASIC16.73■□□□□ 0.27
Usp43Q8BUM9 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.73■□□□□ 0.27
Usp43Q8BUM9 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Usp43Q8BUM9 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Usp43Q8BUM9 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Usp43Q8BUM9 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC16.72■□□□□ 0.27
Usp43Q8BUM9 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Usp43Q8BUM9 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Usp43Q8BUM9 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC16.72■□□□□ 0.27
Usp43Q8BUM9 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Usp43Q8BUM9 Gm37722-201ENSMUST00000193757 208 ntBASIC16.72■□□□□ 0.27
Usp43Q8BUM9 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC16.72■□□□□ 0.27
Usp43Q8BUM9 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Usp43Q8BUM9 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC16.72■□□□□ 0.27
Usp43Q8BUM9 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Usp43Q8BUM9 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Usp43Q8BUM9 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Usp43Q8BUM9 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Usp43Q8BUM9 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Usp43Q8BUM9 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Usp43Q8BUM9 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Usp43Q8BUM9 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Usp43Q8BUM9 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Usp43Q8BUM9 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Usp43Q8BUM9 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Usp43Q8BUM9 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Usp43Q8BUM9 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Usp43Q8BUM9 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Usp43Q8BUM9 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Usp43Q8BUM9 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Usp43Q8BUM9 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Usp43Q8BUM9 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Usp43Q8BUM9 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Usp43Q8BUM9 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Usp43Q8BUM9 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC16.71■□□□□ 0.27
Usp43Q8BUM9 Gm11355-201ENSMUST00000121120 306 ntBASIC16.71■□□□□ 0.27
Usp43Q8BUM9 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC16.71■□□□□ 0.27
Usp43Q8BUM9 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Usp43Q8BUM9 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Usp43Q8BUM9 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Usp43Q8BUM9 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Usp43Q8BUM9 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Usp43Q8BUM9 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Usp43Q8BUM9 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Usp43Q8BUM9 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Usp43Q8BUM9 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Usp43Q8BUM9 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC16.7■□□□□ 0.26
Usp43Q8BUM9 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Usp43Q8BUM9 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Usp43Q8BUM9 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Usp43Q8BUM9 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Usp43Q8BUM9 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Usp43Q8BUM9 Gm10013-201ENSMUST00000106074 672 ntBASIC16.7■□□□□ 0.26
Usp43Q8BUM9 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Usp43Q8BUM9 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Usp43Q8BUM9 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC16.7■□□□□ 0.26
Usp43Q8BUM9 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Usp43Q8BUM9 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Usp43Q8BUM9 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Usp43Q8BUM9 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Usp43Q8BUM9 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Usp43Q8BUM9 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Usp43Q8BUM9 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Usp43Q8BUM9 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Usp43Q8BUM9 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Usp43Q8BUM9 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Usp43Q8BUM9 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC16.7■□□□□ 0.26
Usp43Q8BUM9 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Usp43Q8BUM9 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Usp43Q8BUM9 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Usp43Q8BUM9 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC16.69■□□□□ 0.26
Usp43Q8BUM9 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
Usp43Q8BUM9 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Usp43Q8BUM9 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Usp43Q8BUM9 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Usp43Q8BUM9 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Usp43Q8BUM9 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Usp43Q8BUM9 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Usp43Q8BUM9 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Usp43Q8BUM9 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Usp43Q8BUM9 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Usp43Q8BUM9 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Usp43Q8BUM9 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Usp43Q8BUM9 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC16.69■□□□□ 0.26
Usp43Q8BUM9 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Usp43Q8BUM9 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC16.69■□□□□ 0.26
Usp43Q8BUM9 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Usp43Q8BUM9 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
Usp43Q8BUM9 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Usp43Q8BUM9 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Usp43Q8BUM9 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Usp43Q8BUM9 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Usp43Q8BUM9 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Usp43Q8BUM9 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Usp43Q8BUM9 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Usp43Q8BUM9 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Usp43Q8BUM9 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC16.69■□□□□ 0.26
Usp43Q8BUM9 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC16.68■□□□□ 0.26
Usp43Q8BUM9 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Usp43Q8BUM9 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms