Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Sfr1Q8BP27 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sfr1Q8BP27 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sfr1Q8BP27 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sfr1Q8BP27 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sfr1Q8BP27 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sfr1Q8BP27 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sfr1Q8BP27 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sfr1Q8BP27 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sfr1Q8BP27 Gm16401-202ENSMUST00000197463 2074 ntBASIC16.79■□□□□ 0.28
Sfr1Q8BP27 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sfr1Q8BP27 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sfr1Q8BP27 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sfr1Q8BP27 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sfr1Q8BP27 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Sfr1Q8BP27 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Sfr1Q8BP27 Gm11336-201ENSMUST00000118168 334 ntBASIC16.79■□□□□ 0.28
Sfr1Q8BP27 AA414768-201ENSMUST00000121924 1257 ntBASIC16.79■□□□□ 0.28
Sfr1Q8BP27 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Sfr1Q8BP27 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC16.79■□□□□ 0.28
Sfr1Q8BP27 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Sfr1Q8BP27 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Sfr1Q8BP27 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sfr1Q8BP27 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC16.79■□□□□ 0.28
Sfr1Q8BP27 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sfr1Q8BP27 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sfr1Q8BP27 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC16.79■□□□□ 0.28
Sfr1Q8BP27 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sfr1Q8BP27 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sfr1Q8BP27 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sfr1Q8BP27 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Sfr1Q8BP27 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Sfr1Q8BP27 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC16.79■□□□□ 0.28
Sfr1Q8BP27 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sfr1Q8BP27 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sfr1Q8BP27 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sfr1Q8BP27 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sfr1Q8BP27 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sfr1Q8BP27 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
Sfr1Q8BP27 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC16.78■□□□□ 0.28
Sfr1Q8BP27 Gm6728-201ENSMUST00000178117 1065 ntBASIC16.78■□□□□ 0.28
Sfr1Q8BP27 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC16.78■□□□□ 0.28
Sfr1Q8BP27 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sfr1Q8BP27 Gm5587-201ENSMUST00000206270 674 ntBASIC16.78■□□□□ 0.28
Sfr1Q8BP27 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sfr1Q8BP27 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Sfr1Q8BP27 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Sfr1Q8BP27 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.78■□□□□ 0.28
Sfr1Q8BP27 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sfr1Q8BP27 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Sfr1Q8BP27 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sfr1Q8BP27 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sfr1Q8BP27 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Sfr1Q8BP27 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sfr1Q8BP27 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sfr1Q8BP27 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC16.78■□□□□ 0.28
Sfr1Q8BP27 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sfr1Q8BP27 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sfr1Q8BP27 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Sfr1Q8BP27 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sfr1Q8BP27 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC16.77■□□□□ 0.28
Sfr1Q8BP27 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Sfr1Q8BP27 Gm37722-201ENSMUST00000193757 208 ntBASIC16.77■□□□□ 0.28
Sfr1Q8BP27 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Sfr1Q8BP27 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sfr1Q8BP27 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Sfr1Q8BP27 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
Sfr1Q8BP27 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Sfr1Q8BP27 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Sfr1Q8BP27 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Sfr1Q8BP27 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Sfr1Q8BP27 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sfr1Q8BP27 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sfr1Q8BP27 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Sfr1Q8BP27 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Sfr1Q8BP27 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sfr1Q8BP27 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sfr1Q8BP27 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sfr1Q8BP27 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sfr1Q8BP27 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sfr1Q8BP27 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Sfr1Q8BP27 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Sfr1Q8BP27 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Sfr1Q8BP27 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sfr1Q8BP27 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC16.76■□□□□ 0.27
Sfr1Q8BP27 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
Sfr1Q8BP27 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sfr1Q8BP27 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sfr1Q8BP27 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sfr1Q8BP27 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sfr1Q8BP27 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC16.76■□□□□ 0.27
Sfr1Q8BP27 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Sfr1Q8BP27 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sfr1Q8BP27 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sfr1Q8BP27 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sfr1Q8BP27 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sfr1Q8BP27 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.75■□□□□ 0.27
Sfr1Q8BP27 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sfr1Q8BP27 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sfr1Q8BP27 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms