Protein–RNA interactions for Protein: Q8BHK2

Scn3b, Sodium channel subunit beta-3, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3bQ8BHK2 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Scn3bQ8BHK2 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Scn3bQ8BHK2 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
Scn3bQ8BHK2 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Scn3bQ8BHK2 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Scn3bQ8BHK2 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Scn3bQ8BHK2 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Scn3bQ8BHK2 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC15.41■□□□□ 0.06
Scn3bQ8BHK2 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
Scn3bQ8BHK2 Gm15375-201ENSMUST00000119510 849 ntBASIC15.41■□□□□ 0.06
Scn3bQ8BHK2 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Scn3bQ8BHK2 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC15.41■□□□□ 0.06
Scn3bQ8BHK2 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Scn3bQ8BHK2 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Scn3bQ8BHK2 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Scn3bQ8BHK2 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Scn3bQ8BHK2 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Scn3bQ8BHK2 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Scn3bQ8BHK2 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC15.41■□□□□ 0.06
Scn3bQ8BHK2 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Scn3bQ8BHK2 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
Scn3bQ8BHK2 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Scn3bQ8BHK2 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Scn3bQ8BHK2 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Scn3bQ8BHK2 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scn3bQ8BHK2 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scn3bQ8BHK2 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scn3bQ8BHK2 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Scn3bQ8BHK2 Gm19430-201ENSMUST00000193847 2137 ntBASIC15.4■□□□□ 0.06
Scn3bQ8BHK2 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC15.4■□□□□ 0.06
Scn3bQ8BHK2 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scn3bQ8BHK2 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scn3bQ8BHK2 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scn3bQ8BHK2 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC15.4■□□□□ 0.06
Scn3bQ8BHK2 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scn3bQ8BHK2 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC15.4■□□□□ 0.06
Scn3bQ8BHK2 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Scn3bQ8BHK2 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC15.4■□□□□ 0.06
Scn3bQ8BHK2 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scn3bQ8BHK2 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scn3bQ8BHK2 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Scn3bQ8BHK2 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC15.4■□□□□ 0.06
Scn3bQ8BHK2 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Scn3bQ8BHK2 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Scn3bQ8BHK2 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scn3bQ8BHK2 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Scn3bQ8BHK2 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Scn3bQ8BHK2 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC15.4■□□□□ 0.06
Scn3bQ8BHK2 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Scn3bQ8BHK2 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scn3bQ8BHK2 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scn3bQ8BHK2 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scn3bQ8BHK2 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scn3bQ8BHK2 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Scn3bQ8BHK2 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Scn3bQ8BHK2 CT010444.2-201ENSMUST00000217877 1629 ntBASIC15.39■□□□□ 0.05
Scn3bQ8BHK2 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Scn3bQ8BHK2 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Scn3bQ8BHK2 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Scn3bQ8BHK2 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Scn3bQ8BHK2 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Scn3bQ8BHK2 Gm16011-201ENSMUST00000121567 2662 ntBASIC15.39■□□□□ 0.05
Scn3bQ8BHK2 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Scn3bQ8BHK2 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Scn3bQ8BHK2 Gm42642-201ENSMUST00000200683 355 ntBASIC15.39■□□□□ 0.05
Scn3bQ8BHK2 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Scn3bQ8BHK2 AV356131-201ENSMUST00000206201 750 ntBASIC15.39■□□□□ 0.05
Scn3bQ8BHK2 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Scn3bQ8BHK2 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Scn3bQ8BHK2 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Scn3bQ8BHK2 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Scn3bQ8BHK2 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Scn3bQ8BHK2 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Scn3bQ8BHK2 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Scn3bQ8BHK2 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Scn3bQ8BHK2 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Scn3bQ8BHK2 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
Scn3bQ8BHK2 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Scn3bQ8BHK2 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Scn3bQ8BHK2 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC15.39■□□□□ 0.05
Scn3bQ8BHK2 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC15.39■□□□□ 0.05
Scn3bQ8BHK2 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Scn3bQ8BHK2 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC15.38■□□□□ 0.05
Scn3bQ8BHK2 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Scn3bQ8BHK2 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
Scn3bQ8BHK2 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC15.38■□□□□ 0.05
Scn3bQ8BHK2 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Scn3bQ8BHK2 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Scn3bQ8BHK2 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Scn3bQ8BHK2 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Scn3bQ8BHK2 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC15.38■□□□□ 0.05
Scn3bQ8BHK2 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Scn3bQ8BHK2 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Scn3bQ8BHK2 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Scn3bQ8BHK2 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Scn3bQ8BHK2 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Scn3bQ8BHK2 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Scn3bQ8BHK2 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC15.38■□□□□ 0.05
Scn3bQ8BHK2 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Scn3bQ8BHK2 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms