Protein–RNA interactions for Protein: Q8BHD0

Rab39a, Ras-related protein Rab-39A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab39aQ8BHD0 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC15.27■□□□□ 0.04
Rab39aQ8BHD0 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Rab39aQ8BHD0 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Rab39aQ8BHD0 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rab39aQ8BHD0 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Rab39aQ8BHD0 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rab39aQ8BHD0 Gm11643-201ENSMUST00000119578 864 ntBASIC15.27■□□□□ 0.04
Rab39aQ8BHD0 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Rab39aQ8BHD0 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC15.27■□□□□ 0.04
Rab39aQ8BHD0 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Rab39aQ8BHD0 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rab39aQ8BHD0 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
Rab39aQ8BHD0 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rab39aQ8BHD0 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rab39aQ8BHD0 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC15.27■□□□□ 0.03
Rab39aQ8BHD0 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rab39aQ8BHD0 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rab39aQ8BHD0 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rab39aQ8BHD0 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rab39aQ8BHD0 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rab39aQ8BHD0 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
Rab39aQ8BHD0 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Rab39aQ8BHD0 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rab39aQ8BHD0 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rab39aQ8BHD0 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rab39aQ8BHD0 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rab39aQ8BHD0 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rab39aQ8BHD0 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rab39aQ8BHD0 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rab39aQ8BHD0 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
Rab39aQ8BHD0 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC15.26■□□□□ 0.03
Rab39aQ8BHD0 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rab39aQ8BHD0 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rab39aQ8BHD0 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rab39aQ8BHD0 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC15.26■□□□□ 0.03
Rab39aQ8BHD0 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Rab39aQ8BHD0 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rab39aQ8BHD0 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rab39aQ8BHD0 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rab39aQ8BHD0 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rab39aQ8BHD0 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rab39aQ8BHD0 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rab39aQ8BHD0 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rab39aQ8BHD0 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rab39aQ8BHD0 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC15.25■□□□□ 0.03
Rab39aQ8BHD0 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rab39aQ8BHD0 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rab39aQ8BHD0 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rab39aQ8BHD0 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rab39aQ8BHD0 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rab39aQ8BHD0 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC15.25■□□□□ 0.03
Rab39aQ8BHD0 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rab39aQ8BHD0 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC15.25■□□□□ 0.03
Rab39aQ8BHD0 Gm6576-201ENSMUST00000169678 883 ntBASIC15.25■□□□□ 0.03
Rab39aQ8BHD0 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rab39aQ8BHD0 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rab39aQ8BHD0 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rab39aQ8BHD0 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rab39aQ8BHD0 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rab39aQ8BHD0 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rab39aQ8BHD0 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Rab39aQ8BHD0 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rab39aQ8BHD0 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
Rab39aQ8BHD0 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Rab39aQ8BHD0 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rab39aQ8BHD0 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rab39aQ8BHD0 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rab39aQ8BHD0 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Rab39aQ8BHD0 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rab39aQ8BHD0 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rab39aQ8BHD0 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rab39aQ8BHD0 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rab39aQ8BHD0 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC15.24■□□□□ 0.03
Rab39aQ8BHD0 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Rab39aQ8BHD0 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rab39aQ8BHD0 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rab39aQ8BHD0 Gm13401-201ENSMUST00000117074 291 ntBASIC15.24■□□□□ 0.03
Rab39aQ8BHD0 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
Rab39aQ8BHD0 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rab39aQ8BHD0 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC15.24■□□□□ 0.03
Rab39aQ8BHD0 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Rab39aQ8BHD0 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC15.24■□□□□ 0.03
Rab39aQ8BHD0 AC154649.1-201ENSMUST00000227392 384 ntBASIC15.24■□□□□ 0.03
Rab39aQ8BHD0 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rab39aQ8BHD0 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rab39aQ8BHD0 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
Rab39aQ8BHD0 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rab39aQ8BHD0 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rab39aQ8BHD0 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rab39aQ8BHD0 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Rab39aQ8BHD0 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Rab39aQ8BHD0 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rab39aQ8BHD0 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rab39aQ8BHD0 CT010444.2-201ENSMUST00000217877 1629 ntBASIC15.24■□□□□ 0.03
Rab39aQ8BHD0 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rab39aQ8BHD0 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rab39aQ8BHD0 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Rab39aQ8BHD0 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rab39aQ8BHD0 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rab39aQ8BHD0 AC124581.1-201ENSMUST00000225416 1399 ntBASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms