Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Depdc1bQ8BH88 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Depdc1bQ8BH88 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.94■□□□□ 0.46
Depdc1bQ8BH88 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Depdc1bQ8BH88 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC17.94■□□□□ 0.46
Depdc1bQ8BH88 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Depdc1bQ8BH88 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC17.94■□□□□ 0.46
Depdc1bQ8BH88 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Depdc1bQ8BH88 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Depdc1bQ8BH88 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Depdc1bQ8BH88 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC17.94■□□□□ 0.46
Depdc1bQ8BH88 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Depdc1bQ8BH88 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Depdc1bQ8BH88 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Depdc1bQ8BH88 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Depdc1bQ8BH88 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Depdc1bQ8BH88 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Depdc1bQ8BH88 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC17.93■□□□□ 0.46
Depdc1bQ8BH88 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Depdc1bQ8BH88 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Depdc1bQ8BH88 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Depdc1bQ8BH88 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Depdc1bQ8BH88 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC17.93■□□□□ 0.46
Depdc1bQ8BH88 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Depdc1bQ8BH88 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Depdc1bQ8BH88 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Depdc1bQ8BH88 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Depdc1bQ8BH88 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Depdc1bQ8BH88 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Depdc1bQ8BH88 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Depdc1bQ8BH88 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Depdc1bQ8BH88 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC17.93■□□□□ 0.46
Depdc1bQ8BH88 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Depdc1bQ8BH88 Gm10819-201ENSMUST00000099988 561 ntBASIC17.93■□□□□ 0.46
Depdc1bQ8BH88 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Depdc1bQ8BH88 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Depdc1bQ8BH88 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Depdc1bQ8BH88 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Depdc1bQ8BH88 Gm26917-202ENSMUST00000192833 3329 ntBASIC17.93■□□□□ 0.46
Depdc1bQ8BH88 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC17.93■□□□□ 0.46
Depdc1bQ8BH88 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Depdc1bQ8BH88 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Depdc1bQ8BH88 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Depdc1bQ8BH88 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Depdc1bQ8BH88 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Depdc1bQ8BH88 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Depdc1bQ8BH88 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Depdc1bQ8BH88 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Depdc1bQ8BH88 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Depdc1bQ8BH88 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Depdc1bQ8BH88 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Depdc1bQ8BH88 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Depdc1bQ8BH88 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Depdc1bQ8BH88 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Depdc1bQ8BH88 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Depdc1bQ8BH88 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Depdc1bQ8BH88 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Depdc1bQ8BH88 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Depdc1bQ8BH88 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Depdc1bQ8BH88 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC17.92■□□□□ 0.46
Depdc1bQ8BH88 Gm33142-201ENSMUST00000193913 867 ntBASIC17.92■□□□□ 0.46
Depdc1bQ8BH88 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Depdc1bQ8BH88 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Depdc1bQ8BH88 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Depdc1bQ8BH88 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Depdc1bQ8BH88 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Depdc1bQ8BH88 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Depdc1bQ8BH88 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Depdc1bQ8BH88 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Depdc1bQ8BH88 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Depdc1bQ8BH88 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Depdc1bQ8BH88 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Depdc1bQ8BH88 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Depdc1bQ8BH88 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Depdc1bQ8BH88 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Depdc1bQ8BH88 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.91■□□□□ 0.46
Depdc1bQ8BH88 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Depdc1bQ8BH88 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
Depdc1bQ8BH88 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Depdc1bQ8BH88 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Depdc1bQ8BH88 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Depdc1bQ8BH88 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Depdc1bQ8BH88 Gm10459-201ENSMUST00000202708 1155 ntBASIC17.91■□□□□ 0.46
Depdc1bQ8BH88 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Depdc1bQ8BH88 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Depdc1bQ8BH88 Gm7370-201ENSMUST00000219471 767 ntBASIC17.91■□□□□ 0.46
Depdc1bQ8BH88 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Depdc1bQ8BH88 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Depdc1bQ8BH88 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Depdc1bQ8BH88 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Depdc1bQ8BH88 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Depdc1bQ8BH88 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Depdc1bQ8BH88 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC17.91■□□□□ 0.46
Depdc1bQ8BH88 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Depdc1bQ8BH88 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Depdc1bQ8BH88 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Depdc1bQ8BH88 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Depdc1bQ8BH88 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Depdc1bQ8BH88 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
Depdc1bQ8BH88 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms