Protein–RNA interactions for Protein: Q8BGX0

Trim23, E3 ubiquitin-protein ligase TRIM23, mousemouse

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23Q8BGX0 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC15.92■□□□□ 0.14
Trim23Q8BGX0 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trim23Q8BGX0 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trim23Q8BGX0 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Trim23Q8BGX0 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC15.92■□□□□ 0.14
Trim23Q8BGX0 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trim23Q8BGX0 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trim23Q8BGX0 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trim23Q8BGX0 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Trim23Q8BGX0 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trim23Q8BGX0 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trim23Q8BGX0 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trim23Q8BGX0 Gm45774-201ENSMUST00000211992 2665 ntBASIC15.91■□□□□ 0.14
Trim23Q8BGX0 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trim23Q8BGX0 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim23Q8BGX0 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim23Q8BGX0 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim23Q8BGX0 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim23Q8BGX0 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trim23Q8BGX0 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trim23Q8BGX0 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim23Q8BGX0 Gm27742-201ENSMUST00000184667 60 ntBASIC15.91■□□□□ 0.14
Trim23Q8BGX0 AC125350.1-201ENSMUST00000225115 903 ntBASIC15.91■□□□□ 0.14
Trim23Q8BGX0 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim23Q8BGX0 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Trim23Q8BGX0 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim23Q8BGX0 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim23Q8BGX0 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim23Q8BGX0 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim23Q8BGX0 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC15.91■□□□□ 0.14
Trim23Q8BGX0 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Trim23Q8BGX0 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim23Q8BGX0 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trim23Q8BGX0 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trim23Q8BGX0 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trim23Q8BGX0 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Trim23Q8BGX0 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Trim23Q8BGX0 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Trim23Q8BGX0 Gm37812-201ENSMUST00000195216 2475 ntBASIC15.9■□□□□ 0.14
Trim23Q8BGX0 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trim23Q8BGX0 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
Trim23Q8BGX0 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Trim23Q8BGX0 Gm7367-201ENSMUST00000057611 492 ntBASIC15.9■□□□□ 0.14
Trim23Q8BGX0 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trim23Q8BGX0 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trim23Q8BGX0 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trim23Q8BGX0 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trim23Q8BGX0 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
Trim23Q8BGX0 Gm8839-201ENSMUST00000121279 1645 ntBASIC15.9■□□□□ 0.14
Trim23Q8BGX0 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC15.9■□□□□ 0.14
Trim23Q8BGX0 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trim23Q8BGX0 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC15.9■□□□□ 0.14
Trim23Q8BGX0 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
Trim23Q8BGX0 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim23Q8BGX0 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim23Q8BGX0 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC15.89■□□□□ 0.13
Trim23Q8BGX0 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
Trim23Q8BGX0 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim23Q8BGX0 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Trim23Q8BGX0 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trim23Q8BGX0 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim23Q8BGX0 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC15.89■□□□□ 0.13
Trim23Q8BGX0 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC15.89■□□□□ 0.13
Trim23Q8BGX0 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim23Q8BGX0 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC15.89■□□□□ 0.13
Trim23Q8BGX0 Gm14859-201ENSMUST00000117752 357 ntBASIC15.89■□□□□ 0.13
Trim23Q8BGX0 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trim23Q8BGX0 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trim23Q8BGX0 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trim23Q8BGX0 AC159205.3-201ENSMUST00000224614 874 ntBASIC15.89■□□□□ 0.13
Trim23Q8BGX0 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim23Q8BGX0 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Trim23Q8BGX0 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim23Q8BGX0 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim23Q8BGX0 Gm15743-202ENSMUST00000182690 1901 ntBASIC15.89■□□□□ 0.13
Trim23Q8BGX0 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim23Q8BGX0 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Trim23Q8BGX0 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim23Q8BGX0 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim23Q8BGX0 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim23Q8BGX0 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim23Q8BGX0 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trim23Q8BGX0 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Trim23Q8BGX0 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim23Q8BGX0 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC15.88■□□□□ 0.13
Trim23Q8BGX0 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC15.88■□□□□ 0.13
Trim23Q8BGX0 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC15.88■□□□□ 0.13
Trim23Q8BGX0 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim23Q8BGX0 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim23Q8BGX0 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Trim23Q8BGX0 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim23Q8BGX0 Olfr129-201ENSMUST00000122318 993 ntBASIC15.88■□□□□ 0.13
Trim23Q8BGX0 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC15.88■□□□□ 0.13
Trim23Q8BGX0 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trim23Q8BGX0 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trim23Q8BGX0 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim23Q8BGX0 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim23Q8BGX0 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim23Q8BGX0 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim23Q8BGX0 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms