Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim6Q8BGE7 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC17.57■□□□□ 0.4
Trim6Q8BGE7 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim6Q8BGE7 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trim6Q8BGE7 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim6Q8BGE7 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim6Q8BGE7 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Trim6Q8BGE7 AC093043.3-201ENSMUST00000226531 2273 ntBASIC17.56■□□□□ 0.4
Trim6Q8BGE7 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC17.56■□□□□ 0.4
Trim6Q8BGE7 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC17.56■□□□□ 0.4
Trim6Q8BGE7 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim6Q8BGE7 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trim6Q8BGE7 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.56■□□□□ 0.4
Trim6Q8BGE7 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trim6Q8BGE7 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim6Q8BGE7 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trim6Q8BGE7 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim6Q8BGE7 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
Trim6Q8BGE7 Gm37025-201ENSMUST00000195159 829 ntBASIC17.56■□□□□ 0.4
Trim6Q8BGE7 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
Trim6Q8BGE7 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trim6Q8BGE7 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim6Q8BGE7 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim6Q8BGE7 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim6Q8BGE7 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17.56■□□□□ 0.4
Trim6Q8BGE7 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Trim6Q8BGE7 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim6Q8BGE7 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC17.56■□□□□ 0.4
Trim6Q8BGE7 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Trim6Q8BGE7 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim6Q8BGE7 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim6Q8BGE7 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim6Q8BGE7 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim6Q8BGE7 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim6Q8BGE7 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Trim6Q8BGE7 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim6Q8BGE7 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.55■□□□□ 0.4
Trim6Q8BGE7 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Trim6Q8BGE7 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim6Q8BGE7 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim6Q8BGE7 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim6Q8BGE7 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
Trim6Q8BGE7 Gm17661-201ENSMUST00000170317 270 ntBASIC17.55■□□□□ 0.4
Trim6Q8BGE7 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trim6Q8BGE7 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Trim6Q8BGE7 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC17.55■□□□□ 0.4
Trim6Q8BGE7 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trim6Q8BGE7 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC17.55■□□□□ 0.4
Trim6Q8BGE7 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim6Q8BGE7 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Trim6Q8BGE7 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim6Q8BGE7 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Trim6Q8BGE7 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim6Q8BGE7 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC17.55■□□□□ 0.4
Trim6Q8BGE7 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Trim6Q8BGE7 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Trim6Q8BGE7 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim6Q8BGE7 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim6Q8BGE7 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim6Q8BGE7 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim6Q8BGE7 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim6Q8BGE7 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC17.54■□□□□ 0.4
Trim6Q8BGE7 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim6Q8BGE7 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim6Q8BGE7 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trim6Q8BGE7 Gm14026-201ENSMUST00000120625 1789 ntBASIC17.54■□□□□ 0.4
Trim6Q8BGE7 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim6Q8BGE7 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.54■□□□□ 0.4
Trim6Q8BGE7 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.54■□□□□ 0.4
Trim6Q8BGE7 AC164629.5-201ENSMUST00000220387 632 ntBASIC17.54■□□□□ 0.4
Trim6Q8BGE7 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim6Q8BGE7 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim6Q8BGE7 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim6Q8BGE7 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
Trim6Q8BGE7 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim6Q8BGE7 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim6Q8BGE7 Gm45212-201ENSMUST00000205831 3403 ntBASIC17.54■□□□□ 0.4
Trim6Q8BGE7 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim6Q8BGE7 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Trim6Q8BGE7 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim6Q8BGE7 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim6Q8BGE7 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim6Q8BGE7 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim6Q8BGE7 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim6Q8BGE7 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim6Q8BGE7 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim6Q8BGE7 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Trim6Q8BGE7 Gm43183-201ENSMUST00000200632 547 ntBASIC17.53■□□□□ 0.4
Trim6Q8BGE7 Gm20049-201ENSMUST00000219950 730 ntBASIC17.53■□□□□ 0.4
Trim6Q8BGE7 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim6Q8BGE7 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim6Q8BGE7 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC17.53■□□□□ 0.4
Trim6Q8BGE7 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.53■□□□□ 0.4
Trim6Q8BGE7 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC17.53■□□□□ 0.4
Trim6Q8BGE7 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC17.53■□□□□ 0.4
Trim6Q8BGE7 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim6Q8BGE7 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
Trim6Q8BGE7 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim6Q8BGE7 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim6Q8BGE7 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms