Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usp6nlQ80XC3 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC18.18■□□□□ 0.5
Usp6nlQ80XC3 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usp6nlQ80XC3 Gm43808-201ENSMUST00000202534 2065 ntBASIC18.18■□□□□ 0.5
Usp6nlQ80XC3 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usp6nlQ80XC3 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC18.18■□□□□ 0.5
Usp6nlQ80XC3 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Usp6nlQ80XC3 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Usp6nlQ80XC3 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usp6nlQ80XC3 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usp6nlQ80XC3 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Usp6nlQ80XC3 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usp6nlQ80XC3 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usp6nlQ80XC3 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usp6nlQ80XC3 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usp6nlQ80XC3 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Usp6nlQ80XC3 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usp6nlQ80XC3 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Usp6nlQ80XC3 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Usp6nlQ80XC3 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Usp6nlQ80XC3 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Usp6nlQ80XC3 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Usp6nlQ80XC3 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Usp6nlQ80XC3 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Usp6nlQ80XC3 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Usp6nlQ80XC3 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Usp6nlQ80XC3 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC18.17■□□□□ 0.5
Usp6nlQ80XC3 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Usp6nlQ80XC3 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC18.17■□□□□ 0.5
Usp6nlQ80XC3 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Usp6nlQ80XC3 AC107711.5-202ENSMUST00000226429 702 ntBASIC18.17■□□□□ 0.5
Usp6nlQ80XC3 AC114585.2-202ENSMUST00000228094 426 ntBASIC18.17■□□□□ 0.5
Usp6nlQ80XC3 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Usp6nlQ80XC3 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC18.17■□□□□ 0.5
Usp6nlQ80XC3 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Usp6nlQ80XC3 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Usp6nlQ80XC3 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Usp6nlQ80XC3 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Usp6nlQ80XC3 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Usp6nlQ80XC3 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Usp6nlQ80XC3 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Usp6nlQ80XC3 Gm9889-202ENSMUST00000206983 1577 ntBASIC18.17■□□□□ 0.5
Usp6nlQ80XC3 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Usp6nlQ80XC3 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC18.16■□□□□ 0.5
Usp6nlQ80XC3 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Usp6nlQ80XC3 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Usp6nlQ80XC3 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
Usp6nlQ80XC3 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC18.16■□□□□ 0.5
Usp6nlQ80XC3 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Usp6nlQ80XC3 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Usp6nlQ80XC3 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Usp6nlQ80XC3 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Usp6nlQ80XC3 Gm25990-201ENSMUST00000102440 86 ntBASIC18.16■□□□□ 0.5
Usp6nlQ80XC3 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC18.16■□□□□ 0.5
Usp6nlQ80XC3 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC18.16■□□□□ 0.5
Usp6nlQ80XC3 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC18.16■□□□□ 0.5
Usp6nlQ80XC3 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC18.16■□□□□ 0.5
Usp6nlQ80XC3 Gm7506-201ENSMUST00000207758 815 ntBASIC18.16■□□□□ 0.5
Usp6nlQ80XC3 Gm5364-201ENSMUST00000216789 889 ntBASIC18.16■□□□□ 0.5
Usp6nlQ80XC3 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC18.16■□□□□ 0.5
Usp6nlQ80XC3 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Usp6nlQ80XC3 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Usp6nlQ80XC3 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Usp6nlQ80XC3 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Usp6nlQ80XC3 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
Usp6nlQ80XC3 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Usp6nlQ80XC3 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Usp6nlQ80XC3 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Usp6nlQ80XC3 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Usp6nlQ80XC3 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Usp6nlQ80XC3 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Usp6nlQ80XC3 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC18.15■□□□□ 0.5
Usp6nlQ80XC3 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC18.15■□□□□ 0.5
Usp6nlQ80XC3 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Usp6nlQ80XC3 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Usp6nlQ80XC3 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.15■□□□□ 0.5
Usp6nlQ80XC3 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Usp6nlQ80XC3 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Usp6nlQ80XC3 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Usp6nlQ80XC3 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC18.15■□□□□ 0.5
Usp6nlQ80XC3 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Usp6nlQ80XC3 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Usp6nlQ80XC3 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
Usp6nlQ80XC3 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Usp6nlQ80XC3 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Usp6nlQ80XC3 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Usp6nlQ80XC3 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Usp6nlQ80XC3 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC18.14■□□□□ 0.49
Usp6nlQ80XC3 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
Usp6nlQ80XC3 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Usp6nlQ80XC3 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC18.14■□□□□ 0.49
Usp6nlQ80XC3 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Usp6nlQ80XC3 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC18.14■□□□□ 0.49
Usp6nlQ80XC3 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Usp6nlQ80XC3 Gm8000-201ENSMUST00000188378 592 ntBASIC18.14■□□□□ 0.49
Usp6nlQ80XC3 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC18.14■□□□□ 0.49
Usp6nlQ80XC3 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC18.14■□□□□ 0.49
Usp6nlQ80XC3 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Usp6nlQ80XC3 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Usp6nlQ80XC3 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 76.9 ms