Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Trim36Q80WG7 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trim36Q80WG7 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Trim36Q80WG7 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trim36Q80WG7 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Trim36Q80WG7 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Trim36Q80WG7 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trim36Q80WG7 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
Trim36Q80WG7 Gm13559-201ENSMUST00000120476 863 ntBASIC15.96■□□□□ 0.15
Trim36Q80WG7 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trim36Q80WG7 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trim36Q80WG7 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trim36Q80WG7 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trim36Q80WG7 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
Trim36Q80WG7 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.14
Trim36Q80WG7 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Trim36Q80WG7 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Trim36Q80WG7 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
Trim36Q80WG7 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Trim36Q80WG7 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trim36Q80WG7 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trim36Q80WG7 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trim36Q80WG7 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trim36Q80WG7 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Trim36Q80WG7 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trim36Q80WG7 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trim36Q80WG7 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trim36Q80WG7 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Trim36Q80WG7 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC15.95■□□□□ 0.14
Trim36Q80WG7 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trim36Q80WG7 Gm10517-202ENSMUST00000192970 758 ntBASIC15.95■□□□□ 0.14
Trim36Q80WG7 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trim36Q80WG7 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trim36Q80WG7 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trim36Q80WG7 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trim36Q80WG7 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Trim36Q80WG7 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trim36Q80WG7 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trim36Q80WG7 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trim36Q80WG7 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Trim36Q80WG7 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trim36Q80WG7 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trim36Q80WG7 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trim36Q80WG7 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trim36Q80WG7 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trim36Q80WG7 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC15.94■□□□□ 0.14
Trim36Q80WG7 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC15.94■□□□□ 0.14
Trim36Q80WG7 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trim36Q80WG7 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trim36Q80WG7 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC15.94■□□□□ 0.14
Trim36Q80WG7 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC15.94■□□□□ 0.14
Trim36Q80WG7 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trim36Q80WG7 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trim36Q80WG7 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC15.94■□□□□ 0.14
Trim36Q80WG7 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trim36Q80WG7 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trim36Q80WG7 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trim36Q80WG7 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trim36Q80WG7 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
Trim36Q80WG7 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trim36Q80WG7 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
Trim36Q80WG7 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Trim36Q80WG7 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC15.93■□□□□ 0.14
Trim36Q80WG7 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trim36Q80WG7 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trim36Q80WG7 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trim36Q80WG7 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC15.93■□□□□ 0.14
Trim36Q80WG7 Gm4974-201ENSMUST00000209974 875 ntBASIC15.93■□□□□ 0.14
Trim36Q80WG7 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trim36Q80WG7 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
Trim36Q80WG7 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trim36Q80WG7 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trim36Q80WG7 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC15.93■□□□□ 0.14
Trim36Q80WG7 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trim36Q80WG7 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trim36Q80WG7 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trim36Q80WG7 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trim36Q80WG7 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trim36Q80WG7 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trim36Q80WG7 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Trim36Q80WG7 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trim36Q80WG7 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trim36Q80WG7 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trim36Q80WG7 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trim36Q80WG7 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trim36Q80WG7 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trim36Q80WG7 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trim36Q80WG7 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trim36Q80WG7 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trim36Q80WG7 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC15.92■□□□□ 0.14
Trim36Q80WG7 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC15.92■□□□□ 0.14
Trim36Q80WG7 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
Trim36Q80WG7 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trim36Q80WG7 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC15.92■□□□□ 0.14
Trim36Q80WG7 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trim36Q80WG7 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trim36Q80WG7 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trim36Q80WG7 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trim36Q80WG7 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trim36Q80WG7 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms