Protein–RNA interactions for Protein: Q7TNK1

Rfx4, Transcription factor RFX4, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx4Q7TNK1 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rfx4Q7TNK1 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rfx4Q7TNK1 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rfx4Q7TNK1 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Rfx4Q7TNK1 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rfx4Q7TNK1 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rfx4Q7TNK1 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rfx4Q7TNK1 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rfx4Q7TNK1 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rfx4Q7TNK1 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC15.9■□□□□ 0.14
Rfx4Q7TNK1 Gm16011-201ENSMUST00000121567 2662 ntBASIC15.9■□□□□ 0.14
Rfx4Q7TNK1 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rfx4Q7TNK1 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Rfx4Q7TNK1 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.14
Rfx4Q7TNK1 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Rfx4Q7TNK1 AC093043.3-201ENSMUST00000226531 2273 ntBASIC15.89■□□□□ 0.13
Rfx4Q7TNK1 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rfx4Q7TNK1 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rfx4Q7TNK1 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC15.89■□□□□ 0.13
Rfx4Q7TNK1 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rfx4Q7TNK1 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Rfx4Q7TNK1 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rfx4Q7TNK1 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
Rfx4Q7TNK1 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rfx4Q7TNK1 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC15.89■□□□□ 0.13
Rfx4Q7TNK1 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rfx4Q7TNK1 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rfx4Q7TNK1 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rfx4Q7TNK1 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Rfx4Q7TNK1 AC153526.5-201ENSMUST00000218661 2147 ntBASIC15.89■□□□□ 0.13
Rfx4Q7TNK1 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Rfx4Q7TNK1 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rfx4Q7TNK1 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Rfx4Q7TNK1 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Rfx4Q7TNK1 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rfx4Q7TNK1 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rfx4Q7TNK1 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rfx4Q7TNK1 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Rfx4Q7TNK1 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Rfx4Q7TNK1 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rfx4Q7TNK1 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC15.88■□□□□ 0.13
Rfx4Q7TNK1 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rfx4Q7TNK1 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rfx4Q7TNK1 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rfx4Q7TNK1 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rfx4Q7TNK1 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Rfx4Q7TNK1 Gm24841-201ENSMUST00000158676 357 ntBASIC15.88■□□□□ 0.13
Rfx4Q7TNK1 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rfx4Q7TNK1 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC15.88■□□□□ 0.13
Rfx4Q7TNK1 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rfx4Q7TNK1 Alkbh1-212ENSMUST00000185301 408 ntBASIC15.88■□□□□ 0.13
Rfx4Q7TNK1 Gm37025-201ENSMUST00000195159 829 ntBASIC15.88■□□□□ 0.13
Rfx4Q7TNK1 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Rfx4Q7TNK1 Gm42569-201ENSMUST00000200539 472 ntBASIC15.88■□□□□ 0.13
Rfx4Q7TNK1 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Rfx4Q7TNK1 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rfx4Q7TNK1 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Rfx4Q7TNK1 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Rfx4Q7TNK1 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rfx4Q7TNK1 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rfx4Q7TNK1 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rfx4Q7TNK1 Gm44616-201ENSMUST00000206417 1732 ntBASIC15.88■□□□□ 0.13
Rfx4Q7TNK1 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rfx4Q7TNK1 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Rfx4Q7TNK1 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rfx4Q7TNK1 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Rfx4Q7TNK1 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rfx4Q7TNK1 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rfx4Q7TNK1 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Rfx4Q7TNK1 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rfx4Q7TNK1 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rfx4Q7TNK1 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rfx4Q7TNK1 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC15.87■□□□□ 0.13
Rfx4Q7TNK1 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rfx4Q7TNK1 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rfx4Q7TNK1 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rfx4Q7TNK1 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
Rfx4Q7TNK1 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC15.87■□□□□ 0.13
Rfx4Q7TNK1 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Rfx4Q7TNK1 Gm2559-201ENSMUST00000201323 363 ntBASIC15.87■□□□□ 0.13
Rfx4Q7TNK1 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Rfx4Q7TNK1 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Rfx4Q7TNK1 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
Rfx4Q7TNK1 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Rfx4Q7TNK1 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rfx4Q7TNK1 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Rfx4Q7TNK1 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
Rfx4Q7TNK1 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rfx4Q7TNK1 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Rfx4Q7TNK1 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC15.86■□□□□ 0.13
Rfx4Q7TNK1 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Rfx4Q7TNK1 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rfx4Q7TNK1 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
Rfx4Q7TNK1 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Rfx4Q7TNK1 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Rfx4Q7TNK1 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rfx4Q7TNK1 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rfx4Q7TNK1 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rfx4Q7TNK1 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rfx4Q7TNK1 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC15.86■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms