Protein–RNA interactions for Protein: Q78RX3

Smim12, Small integral membrane protein 12, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim12Q78RX3 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smim12Q78RX3 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC13.9□□□□□ -0.18
Smim12Q78RX3 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Smim12Q78RX3 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC13.9□□□□□ -0.18
Smim12Q78RX3 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smim12Q78RX3 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smim12Q78RX3 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
Smim12Q78RX3 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smim12Q78RX3 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smim12Q78RX3 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smim12Q78RX3 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smim12Q78RX3 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smim12Q78RX3 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smim12Q78RX3 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smim12Q78RX3 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smim12Q78RX3 AC154855.1-201ENSMUST00000227353 1458 ntBASIC13.89□□□□□ -0.19
Smim12Q78RX3 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Smim12Q78RX3 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Smim12Q78RX3 Gm12085-201ENSMUST00000119263 940 ntBASIC13.89□□□□□ -0.19
Smim12Q78RX3 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC13.89□□□□□ -0.19
Smim12Q78RX3 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Smim12Q78RX3 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smim12Q78RX3 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC13.89□□□□□ -0.19
Smim12Q78RX3 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC13.89□□□□□ -0.19
Smim12Q78RX3 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
Smim12Q78RX3 Timm23-208ENSMUST00000226683 750 ntBASIC13.89□□□□□ -0.19
Smim12Q78RX3 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smim12Q78RX3 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smim12Q78RX3 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smim12Q78RX3 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Smim12Q78RX3 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smim12Q78RX3 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smim12Q78RX3 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smim12Q78RX3 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Smim12Q78RX3 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smim12Q78RX3 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smim12Q78RX3 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smim12Q78RX3 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smim12Q78RX3 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smim12Q78RX3 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smim12Q78RX3 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smim12Q78RX3 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC13.89□□□□□ -0.19
Smim12Q78RX3 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Smim12Q78RX3 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC13.89□□□□□ -0.19
Smim12Q78RX3 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smim12Q78RX3 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
Smim12Q78RX3 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Smim12Q78RX3 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC13.88□□□□□ -0.19
Smim12Q78RX3 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC13.88□□□□□ -0.19
Smim12Q78RX3 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Smim12Q78RX3 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smim12Q78RX3 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Smim12Q78RX3 Gm45203-201ENSMUST00000206384 1831 ntBASIC13.88□□□□□ -0.19
Smim12Q78RX3 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smim12Q78RX3 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smim12Q78RX3 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smim12Q78RX3 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Smim12Q78RX3 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smim12Q78RX3 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smim12Q78RX3 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smim12Q78RX3 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smim12Q78RX3 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Smim12Q78RX3 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smim12Q78RX3 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Smim12Q78RX3 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Smim12Q78RX3 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smim12Q78RX3 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smim12Q78RX3 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smim12Q78RX3 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smim12Q78RX3 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Smim12Q78RX3 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC13.87□□□□□ -0.19
Smim12Q78RX3 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smim12Q78RX3 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smim12Q78RX3 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Smim12Q78RX3 Gm7791-201ENSMUST00000219066 539 ntBASIC13.87□□□□□ -0.19
Smim12Q78RX3 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smim12Q78RX3 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smim12Q78RX3 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smim12Q78RX3 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Smim12Q78RX3 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smim12Q78RX3 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Smim12Q78RX3 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smim12Q78RX3 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Smim12Q78RX3 Actl10-202ENSMUST00000226583 1501 ntBASIC13.86□□□□□ -0.19
Smim12Q78RX3 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Smim12Q78RX3 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smim12Q78RX3 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smim12Q78RX3 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smim12Q78RX3 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smim12Q78RX3 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smim12Q78RX3 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Smim12Q78RX3 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Smim12Q78RX3 Odf3b-204ENSMUST00000227834 930 ntBASIC13.86□□□□□ -0.19
Smim12Q78RX3 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smim12Q78RX3 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smim12Q78RX3 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Smim12Q78RX3 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smim12Q78RX3 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Smim12Q78RX3 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
Smim12Q78RX3 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms