Protein–RNA interactions for Protein: Q6XAS4

Ssxb3, SSXB3 protein, mousemouse

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssxb3Q6XAS4 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ssxb3Q6XAS4 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ssxb3Q6XAS4 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ssxb3Q6XAS4 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ssxb3Q6XAS4 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ssxb3Q6XAS4 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ssxb3Q6XAS4 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
Ssxb3Q6XAS4 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Ssxb3Q6XAS4 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
Ssxb3Q6XAS4 Gm13186-201ENSMUST00000118031 316 ntBASIC16.37■□□□□ 0.21
Ssxb3Q6XAS4 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC16.37■□□□□ 0.21
Ssxb3Q6XAS4 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ssxb3Q6XAS4 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC16.37■□□□□ 0.21
Ssxb3Q6XAS4 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC16.37■□□□□ 0.21
Ssxb3Q6XAS4 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ssxb3Q6XAS4 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ssxb3Q6XAS4 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC16.37■□□□□ 0.21
Ssxb3Q6XAS4 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Ssxb3Q6XAS4 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ssxb3Q6XAS4 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ssxb3Q6XAS4 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ssxb3Q6XAS4 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ssxb3Q6XAS4 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ssxb3Q6XAS4 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ssxb3Q6XAS4 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Ssxb3Q6XAS4 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Ssxb3Q6XAS4 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ssxb3Q6XAS4 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ssxb3Q6XAS4 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ssxb3Q6XAS4 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Ssxb3Q6XAS4 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Ssxb3Q6XAS4 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ssxb3Q6XAS4 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ssxb3Q6XAS4 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ssxb3Q6XAS4 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ssxb3Q6XAS4 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ssxb3Q6XAS4 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ssxb3Q6XAS4 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Ssxb3Q6XAS4 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Ssxb3Q6XAS4 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC16.36■□□□□ 0.21
Ssxb3Q6XAS4 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
Ssxb3Q6XAS4 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC16.36■□□□□ 0.21
Ssxb3Q6XAS4 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC16.36■□□□□ 0.21
Ssxb3Q6XAS4 Spcs1-207ENSMUST00000228767 1008 ntBASIC16.36■□□□□ 0.21
Ssxb3Q6XAS4 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ssxb3Q6XAS4 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ssxb3Q6XAS4 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ssxb3Q6XAS4 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Ssxb3Q6XAS4 Phf7-203ENSMUST00000226565 1971 ntBASIC16.36■□□□□ 0.21
Ssxb3Q6XAS4 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ssxb3Q6XAS4 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ssxb3Q6XAS4 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ssxb3Q6XAS4 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Ssxb3Q6XAS4 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ssxb3Q6XAS4 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ssxb3Q6XAS4 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ssxb3Q6XAS4 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ssxb3Q6XAS4 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Ssxb3Q6XAS4 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ssxb3Q6XAS4 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC16.35■□□□□ 0.21
Ssxb3Q6XAS4 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ssxb3Q6XAS4 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC16.35■□□□□ 0.21
Ssxb3Q6XAS4 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.35■□□□□ 0.21
Ssxb3Q6XAS4 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ssxb3Q6XAS4 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC16.35■□□□□ 0.21
Ssxb3Q6XAS4 Gm7370-201ENSMUST00000219471 767 ntBASIC16.35■□□□□ 0.21
Ssxb3Q6XAS4 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ssxb3Q6XAS4 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ssxb3Q6XAS4 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Ssxb3Q6XAS4 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
Ssxb3Q6XAS4 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ssxb3Q6XAS4 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ssxb3Q6XAS4 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ssxb3Q6XAS4 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Ssxb3Q6XAS4 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ssxb3Q6XAS4 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ssxb3Q6XAS4 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ssxb3Q6XAS4 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Ssxb3Q6XAS4 Actl10-202ENSMUST00000226583 1501 ntBASIC16.35■□□□□ 0.21
Ssxb3Q6XAS4 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ssxb3Q6XAS4 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ssxb3Q6XAS4 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ssxb3Q6XAS4 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ssxb3Q6XAS4 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ssxb3Q6XAS4 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ssxb3Q6XAS4 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ssxb3Q6XAS4 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ssxb3Q6XAS4 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ssxb3Q6XAS4 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ssxb3Q6XAS4 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ssxb3Q6XAS4 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ssxb3Q6XAS4 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ssxb3Q6XAS4 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ssxb3Q6XAS4 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Ssxb3Q6XAS4 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ssxb3Q6XAS4 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC16.34■□□□□ 0.21
Ssxb3Q6XAS4 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ssxb3Q6XAS4 Gm30025-201ENSMUST00000218555 728 ntBASIC16.34■□□□□ 0.21
Ssxb3Q6XAS4 AC112142.1-201ENSMUST00000228796 918 ntBASIC16.34■□□□□ 0.21
Ssxb3Q6XAS4 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms