Protein–RNA interactions for Protein: Q6XAS3

Ssx9, MCG116991, isoform CRA_b, mousemouse

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssx9Q6XAS3 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
Ssx9Q6XAS3 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ssx9Q6XAS3 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ssx9Q6XAS3 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC16.44■□□□□ 0.22
Ssx9Q6XAS3 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ssx9Q6XAS3 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Ssx9Q6XAS3 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ssx9Q6XAS3 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ssx9Q6XAS3 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC16.44■□□□□ 0.22
Ssx9Q6XAS3 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
Ssx9Q6XAS3 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ssx9Q6XAS3 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ssx9Q6XAS3 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ssx9Q6XAS3 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ssx9Q6XAS3 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ssx9Q6XAS3 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ssx9Q6XAS3 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ssx9Q6XAS3 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ssx9Q6XAS3 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.43■□□□□ 0.22
Ssx9Q6XAS3 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ssx9Q6XAS3 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ssx9Q6XAS3 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ssx9Q6XAS3 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ssx9Q6XAS3 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ssx9Q6XAS3 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ssx9Q6XAS3 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ssx9Q6XAS3 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ssx9Q6XAS3 Gm9484-201ENSMUST00000195892 1159 ntBASIC16.43■□□□□ 0.22
Ssx9Q6XAS3 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC16.43■□□□□ 0.22
Ssx9Q6XAS3 AC112142.1-201ENSMUST00000228796 918 ntBASIC16.43■□□□□ 0.22
Ssx9Q6XAS3 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ssx9Q6XAS3 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Ssx9Q6XAS3 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ssx9Q6XAS3 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ssx9Q6XAS3 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ssx9Q6XAS3 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ssx9Q6XAS3 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ssx9Q6XAS3 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ssx9Q6XAS3 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ssx9Q6XAS3 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ssx9Q6XAS3 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ssx9Q6XAS3 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ssx9Q6XAS3 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ssx9Q6XAS3 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ssx9Q6XAS3 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ssx9Q6XAS3 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ssx9Q6XAS3 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ssx9Q6XAS3 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ssx9Q6XAS3 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
Ssx9Q6XAS3 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ssx9Q6XAS3 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ssx9Q6XAS3 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ssx9Q6XAS3 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ssx9Q6XAS3 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ssx9Q6XAS3 Gm37055-201ENSMUST00000191866 133 ntBASIC16.42■□□□□ 0.22
Ssx9Q6XAS3 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ssx9Q6XAS3 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC16.42■□□□□ 0.22
Ssx9Q6XAS3 AC115863.1-201ENSMUST00000214815 1813 ntBASIC16.42■□□□□ 0.22
Ssx9Q6XAS3 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ssx9Q6XAS3 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ssx9Q6XAS3 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ssx9Q6XAS3 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.42■□□□□ 0.22
Ssx9Q6XAS3 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC16.42■□□□□ 0.22
Ssx9Q6XAS3 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ssx9Q6XAS3 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ssx9Q6XAS3 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ssx9Q6XAS3 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ssx9Q6XAS3 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Ssx9Q6XAS3 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ssx9Q6XAS3 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ssx9Q6XAS3 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC16.41■□□□□ 0.22
Ssx9Q6XAS3 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ssx9Q6XAS3 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ssx9Q6XAS3 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ssx9Q6XAS3 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ssx9Q6XAS3 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ssx9Q6XAS3 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ssx9Q6XAS3 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC16.41■□□□□ 0.22
Ssx9Q6XAS3 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Ssx9Q6XAS3 Gm2274-201ENSMUST00000184539 609 ntBASIC16.41■□□□□ 0.22
Ssx9Q6XAS3 AL672049.1-201ENSMUST00000197943 91 ntBASIC16.41■□□□□ 0.22
Ssx9Q6XAS3 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC16.41■□□□□ 0.22
Ssx9Q6XAS3 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC16.41■□□□□ 0.22
Ssx9Q6XAS3 Gm18115-201ENSMUST00000221209 621 ntBASIC16.41■□□□□ 0.22
Ssx9Q6XAS3 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ssx9Q6XAS3 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Ssx9Q6XAS3 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ssx9Q6XAS3 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ssx9Q6XAS3 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ssx9Q6XAS3 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Ssx9Q6XAS3 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Ssx9Q6XAS3 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ssx9Q6XAS3 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ssx9Q6XAS3 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ssx9Q6XAS3 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.41■□□□□ 0.22
Ssx9Q6XAS3 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ssx9Q6XAS3 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ssx9Q6XAS3 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ssx9Q6XAS3 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ssx9Q6XAS3 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms