Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rif1Q6PR54 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rif1Q6PR54 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Rif1Q6PR54 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC13.86□□□□□ -0.19
Rif1Q6PR54 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC13.86□□□□□ -0.19
Rif1Q6PR54 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Rif1Q6PR54 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC13.86□□□□□ -0.19
Rif1Q6PR54 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rif1Q6PR54 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC13.86□□□□□ -0.19
Rif1Q6PR54 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC13.86□□□□□ -0.19
Rif1Q6PR54 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rif1Q6PR54 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Rif1Q6PR54 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Rif1Q6PR54 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rif1Q6PR54 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rif1Q6PR54 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rif1Q6PR54 Gm43006-201ENSMUST00000197702 1602 ntBASIC13.86□□□□□ -0.19
Rif1Q6PR54 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC13.86□□□□□ -0.19
Rif1Q6PR54 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rif1Q6PR54 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rif1Q6PR54 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rif1Q6PR54 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rif1Q6PR54 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC13.85□□□□□ -0.19
Rif1Q6PR54 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Rif1Q6PR54 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rif1Q6PR54 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC13.85□□□□□ -0.19
Rif1Q6PR54 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rif1Q6PR54 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Rif1Q6PR54 Gm43545-201ENSMUST00000196765 2779 ntBASIC13.85□□□□□ -0.19
Rif1Q6PR54 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC13.85□□□□□ -0.19
Rif1Q6PR54 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Rif1Q6PR54 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rif1Q6PR54 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rif1Q6PR54 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Rif1Q6PR54 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Rif1Q6PR54 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rif1Q6PR54 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
Rif1Q6PR54 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Rif1Q6PR54 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rif1Q6PR54 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rif1Q6PR54 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Rif1Q6PR54 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Rif1Q6PR54 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Rif1Q6PR54 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Rif1Q6PR54 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Rif1Q6PR54 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC13.85□□□□□ -0.19
Rif1Q6PR54 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Rif1Q6PR54 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Rif1Q6PR54 Gm45747-201ENSMUST00000212203 999 ntBASIC13.85□□□□□ -0.19
Rif1Q6PR54 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Rif1Q6PR54 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rif1Q6PR54 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Rif1Q6PR54 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Rif1Q6PR54 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Rif1Q6PR54 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rif1Q6PR54 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rif1Q6PR54 Gm5837-201ENSMUST00000191844 1369 ntBASIC13.85□□□□□ -0.19
Rif1Q6PR54 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Rif1Q6PR54 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Rif1Q6PR54 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
Rif1Q6PR54 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rif1Q6PR54 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rif1Q6PR54 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC13.84□□□□□ -0.19
Rif1Q6PR54 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rif1Q6PR54 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rif1Q6PR54 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Rif1Q6PR54 Gm28631-201ENSMUST00000190740 334 ntBASIC13.84□□□□□ -0.19
Rif1Q6PR54 Gm43474-201ENSMUST00000196415 774 ntBASIC13.84□□□□□ -0.19
Rif1Q6PR54 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC13.84□□□□□ -0.19
Rif1Q6PR54 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rif1Q6PR54 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rif1Q6PR54 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rif1Q6PR54 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rif1Q6PR54 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Rif1Q6PR54 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rif1Q6PR54 Gm13186-201ENSMUST00000118031 316 ntBASIC13.84□□□□□ -0.19
Rif1Q6PR54 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC13.84□□□□□ -0.19
Rif1Q6PR54 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC13.84□□□□□ -0.19
Rif1Q6PR54 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC13.84□□□□□ -0.19
Rif1Q6PR54 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC13.84□□□□□ -0.19
Rif1Q6PR54 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC13.84□□□□□ -0.19
Rif1Q6PR54 Gm44492-201ENSMUST00000197012 141 ntBASIC13.84□□□□□ -0.19
Rif1Q6PR54 AC159295.1-201ENSMUST00000225326 940 ntBASIC13.84□□□□□ -0.19
Rif1Q6PR54 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Rif1Q6PR54 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Rif1Q6PR54 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rif1Q6PR54 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Rif1Q6PR54 Gm25745-201ENSMUST00000174945 133 ntBASIC13.83□□□□□ -0.19
Rif1Q6PR54 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Rif1Q6PR54 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rif1Q6PR54 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rif1Q6PR54 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC13.83□□□□□ -0.2
Rif1Q6PR54 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Rif1Q6PR54 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC13.83□□□□□ -0.2
Rif1Q6PR54 Hsf1-204ENSMUST00000226872 2104 ntBASIC13.83□□□□□ -0.2
Rif1Q6PR54 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rif1Q6PR54 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rif1Q6PR54 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
Rif1Q6PR54 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC13.83□□□□□ -0.2
Rif1Q6PR54 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC13.83□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms