Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nup98Q6PFD9 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nup98Q6PFD9 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Nup98Q6PFD9 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC19.37■□□□□ 0.69
Nup98Q6PFD9 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC19.37■□□□□ 0.69
Nup98Q6PFD9 AC084391.1-201ENSMUST00000200651 141 ntBASIC19.37■□□□□ 0.69
Nup98Q6PFD9 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nup98Q6PFD9 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nup98Q6PFD9 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC19.37■□□□□ 0.69
Nup98Q6PFD9 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nup98Q6PFD9 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Nup98Q6PFD9 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Nup98Q6PFD9 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nup98Q6PFD9 Gm18856-201ENSMUST00000178096 1374 ntBASIC19.36■□□□□ 0.69
Nup98Q6PFD9 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Nup98Q6PFD9 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Nup98Q6PFD9 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Nup98Q6PFD9 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Nup98Q6PFD9 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC19.36■□□□□ 0.69
Nup98Q6PFD9 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC19.36■□□□□ 0.69
Nup98Q6PFD9 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC19.36■□□□□ 0.69
Nup98Q6PFD9 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Nup98Q6PFD9 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Nup98Q6PFD9 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Nup98Q6PFD9 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nup98Q6PFD9 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
Nup98Q6PFD9 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Nup98Q6PFD9 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nup98Q6PFD9 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nup98Q6PFD9 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC19.36■□□□□ 0.69
Nup98Q6PFD9 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nup98Q6PFD9 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC19.35■□□□□ 0.69
Nup98Q6PFD9 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nup98Q6PFD9 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Nup98Q6PFD9 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC19.35■□□□□ 0.69
Nup98Q6PFD9 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Nup98Q6PFD9 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nup98Q6PFD9 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC19.35■□□□□ 0.69
Nup98Q6PFD9 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nup98Q6PFD9 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Nup98Q6PFD9 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Nup98Q6PFD9 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nup98Q6PFD9 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nup98Q6PFD9 Gm27628-201ENSMUST00000184911 107 ntBASIC19.35■□□□□ 0.69
Nup98Q6PFD9 AC132104.2-201ENSMUST00000215011 266 ntBASIC19.35■□□□□ 0.69
Nup98Q6PFD9 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC19.35■□□□□ 0.69
Nup98Q6PFD9 Psmb5-202ENSMUST00000227257 622 ntBASIC19.35■□□□□ 0.69
Nup98Q6PFD9 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Nup98Q6PFD9 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nup98Q6PFD9 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nup98Q6PFD9 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nup98Q6PFD9 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC19.34■□□□□ 0.69
Nup98Q6PFD9 AC154527.4-201ENSMUST00000224364 1667 ntBASIC19.34■□□□□ 0.69
Nup98Q6PFD9 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nup98Q6PFD9 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nup98Q6PFD9 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Nup98Q6PFD9 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Nup98Q6PFD9 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Nup98Q6PFD9 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Nup98Q6PFD9 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nup98Q6PFD9 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nup98Q6PFD9 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nup98Q6PFD9 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nup98Q6PFD9 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nup98Q6PFD9 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nup98Q6PFD9 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Nup98Q6PFD9 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Nup98Q6PFD9 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Nup98Q6PFD9 Gm27646-201ENSMUST00000183989 110 ntBASIC19.33■□□□□ 0.69
Nup98Q6PFD9 AV026068-213ENSMUST00000223675 1171 ntBASIC19.33■□□□□ 0.69
Nup98Q6PFD9 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC19.33■□□□□ 0.69
Nup98Q6PFD9 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Nup98Q6PFD9 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nup98Q6PFD9 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Nup98Q6PFD9 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.68
Nup98Q6PFD9 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nup98Q6PFD9 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nup98Q6PFD9 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Nup98Q6PFD9 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
Nup98Q6PFD9 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nup98Q6PFD9 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nup98Q6PFD9 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nup98Q6PFD9 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nup98Q6PFD9 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC19.32■□□□□ 0.68
Nup98Q6PFD9 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Nup98Q6PFD9 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nup98Q6PFD9 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC19.32■□□□□ 0.68
Nup98Q6PFD9 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Nup98Q6PFD9 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Nup98Q6PFD9 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Nup98Q6PFD9 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
Nup98Q6PFD9 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC19.32■□□□□ 0.68
Nup98Q6PFD9 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Nup98Q6PFD9 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nup98Q6PFD9 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nup98Q6PFD9 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Nup98Q6PFD9 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Nup98Q6PFD9 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Nup98Q6PFD9 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC19.32■□□□□ 0.68
Nup98Q6PFD9 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms