Protein–RNA interactions for Protein: Q6PCM1

Kdm3a, Lysine-specific demethylase 3A, mousemouse

Predictions only

Length 1,323 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm3aQ6PCM1 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Kdm3aQ6PCM1 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Kdm3aQ6PCM1 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Kdm3aQ6PCM1 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Kdm3aQ6PCM1 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Kdm3aQ6PCM1 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Kdm3aQ6PCM1 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Kdm3aQ6PCM1 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC19.86■□□□□ 0.77
Kdm3aQ6PCM1 Gm44454-201ENSMUST00000198541 138 ntBASIC19.86■□□□□ 0.77
Kdm3aQ6PCM1 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Kdm3aQ6PCM1 Gm36858-201ENSMUST00000194501 2391 ntBASIC19.86■□□□□ 0.77
Kdm3aQ6PCM1 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Kdm3aQ6PCM1 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
Kdm3aQ6PCM1 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Kdm3aQ6PCM1 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Kdm3aQ6PCM1 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Kdm3aQ6PCM1 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC19.85■□□□□ 0.77
Kdm3aQ6PCM1 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Kdm3aQ6PCM1 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Kdm3aQ6PCM1 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Kdm3aQ6PCM1 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Kdm3aQ6PCM1 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Kdm3aQ6PCM1 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC19.85■□□□□ 0.77
Kdm3aQ6PCM1 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Kdm3aQ6PCM1 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
Kdm3aQ6PCM1 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Kdm3aQ6PCM1 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Kdm3aQ6PCM1 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Kdm3aQ6PCM1 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Kdm3aQ6PCM1 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC19.85■□□□□ 0.77
Kdm3aQ6PCM1 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Kdm3aQ6PCM1 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Kdm3aQ6PCM1 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Kdm3aQ6PCM1 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Kdm3aQ6PCM1 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Kdm3aQ6PCM1 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Kdm3aQ6PCM1 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Kdm3aQ6PCM1 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
Kdm3aQ6PCM1 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Kdm3aQ6PCM1 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Kdm3aQ6PCM1 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Kdm3aQ6PCM1 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Kdm3aQ6PCM1 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Kdm3aQ6PCM1 Gm15635-204ENSMUST00000208024 2539 ntBASIC19.84■□□□□ 0.77
Kdm3aQ6PCM1 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC19.84■□□□□ 0.77
Kdm3aQ6PCM1 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC19.84■□□□□ 0.77
Kdm3aQ6PCM1 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Kdm3aQ6PCM1 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC19.84■□□□□ 0.77
Kdm3aQ6PCM1 Gm34391-201ENSMUST00000203706 907 ntBASIC19.84■□□□□ 0.77
Kdm3aQ6PCM1 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Kdm3aQ6PCM1 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Kdm3aQ6PCM1 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Kdm3aQ6PCM1 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Kdm3aQ6PCM1 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Kdm3aQ6PCM1 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Kdm3aQ6PCM1 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Kdm3aQ6PCM1 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Kdm3aQ6PCM1 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
Kdm3aQ6PCM1 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Kdm3aQ6PCM1 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Kdm3aQ6PCM1 Gm24589-201ENSMUST00000116692 94 ntBASIC19.83■□□□□ 0.77
Kdm3aQ6PCM1 Gm15165-201ENSMUST00000118140 502 ntBASIC19.83■□□□□ 0.77
Kdm3aQ6PCM1 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC19.83■□□□□ 0.77
Kdm3aQ6PCM1 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Kdm3aQ6PCM1 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Kdm3aQ6PCM1 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Kdm3aQ6PCM1 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Kdm3aQ6PCM1 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Kdm3aQ6PCM1 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Kdm3aQ6PCM1 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC19.83■□□□□ 0.76
Kdm3aQ6PCM1 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
Kdm3aQ6PCM1 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Kdm3aQ6PCM1 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Kdm3aQ6PCM1 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Kdm3aQ6PCM1 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Kdm3aQ6PCM1 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Kdm3aQ6PCM1 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Kdm3aQ6PCM1 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Kdm3aQ6PCM1 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
Kdm3aQ6PCM1 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Kdm3aQ6PCM1 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Kdm3aQ6PCM1 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC19.82■□□□□ 0.76
Kdm3aQ6PCM1 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Kdm3aQ6PCM1 Birc2-201ENSMUST00000054878 378 ntBASIC19.82■□□□□ 0.76
Kdm3aQ6PCM1 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Kdm3aQ6PCM1 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Kdm3aQ6PCM1 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Kdm3aQ6PCM1 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Kdm3aQ6PCM1 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Kdm3aQ6PCM1 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Kdm3aQ6PCM1 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Kdm3aQ6PCM1 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Kdm3aQ6PCM1 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Kdm3aQ6PCM1 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Kdm3aQ6PCM1 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC19.81■□□□□ 0.76
Kdm3aQ6PCM1 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Kdm3aQ6PCM1 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC19.81■□□□□ 0.76
Kdm3aQ6PCM1 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Kdm3aQ6PCM1 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Kdm3aQ6PCM1 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms