Protein–RNA interactions for Protein: Q6NS82

Retreg2, Reticulophagy regulator 2, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg2Q6NS82 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
Retreg2Q6NS82 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retreg2Q6NS82 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retreg2Q6NS82 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retreg2Q6NS82 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retreg2Q6NS82 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Retreg2Q6NS82 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retreg2Q6NS82 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Retreg2Q6NS82 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retreg2Q6NS82 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Retreg2Q6NS82 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retreg2Q6NS82 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Retreg2Q6NS82 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retreg2Q6NS82 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retreg2Q6NS82 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retreg2Q6NS82 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retreg2Q6NS82 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retreg2Q6NS82 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retreg2Q6NS82 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Retreg2Q6NS82 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Retreg2Q6NS82 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Retreg2Q6NS82 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retreg2Q6NS82 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retreg2Q6NS82 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retreg2Q6NS82 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retreg2Q6NS82 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retreg2Q6NS82 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retreg2Q6NS82 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retreg2Q6NS82 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC17.74■□□□□ 0.43
Retreg2Q6NS82 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Retreg2Q6NS82 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
Retreg2Q6NS82 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Retreg2Q6NS82 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Retreg2Q6NS82 AC154471.1-201ENSMUST00000224418 436 ntBASIC17.74■□□□□ 0.43
Retreg2Q6NS82 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retreg2Q6NS82 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retreg2Q6NS82 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retreg2Q6NS82 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retreg2Q6NS82 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retreg2Q6NS82 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Retreg2Q6NS82 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retreg2Q6NS82 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retreg2Q6NS82 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Retreg2Q6NS82 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retreg2Q6NS82 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retreg2Q6NS82 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retreg2Q6NS82 Ank2-226ENSMUST00000189368 339 ntBASIC17.73■□□□□ 0.43
Retreg2Q6NS82 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC17.73■□□□□ 0.43
Retreg2Q6NS82 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retreg2Q6NS82 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retreg2Q6NS82 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retreg2Q6NS82 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Retreg2Q6NS82 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retreg2Q6NS82 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Retreg2Q6NS82 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retreg2Q6NS82 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retreg2Q6NS82 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retreg2Q6NS82 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retreg2Q6NS82 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retreg2Q6NS82 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Retreg2Q6NS82 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC17.72■□□□□ 0.43
Retreg2Q6NS82 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
Retreg2Q6NS82 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retreg2Q6NS82 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retreg2Q6NS82 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retreg2Q6NS82 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retreg2Q6NS82 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Retreg2Q6NS82 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Retreg2Q6NS82 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
Retreg2Q6NS82 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retreg2Q6NS82 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Retreg2Q6NS82 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
Retreg2Q6NS82 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retreg2Q6NS82 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retreg2Q6NS82 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retreg2Q6NS82 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC17.72■□□□□ 0.43
Retreg2Q6NS82 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Retreg2Q6NS82 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC17.72■□□□□ 0.43
Retreg2Q6NS82 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC17.72■□□□□ 0.43
Retreg2Q6NS82 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC17.72■□□□□ 0.43
Retreg2Q6NS82 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retreg2Q6NS82 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retreg2Q6NS82 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Retreg2Q6NS82 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retreg2Q6NS82 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Retreg2Q6NS82 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retreg2Q6NS82 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retreg2Q6NS82 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retreg2Q6NS82 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC17.72■□□□□ 0.43
Retreg2Q6NS82 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retreg2Q6NS82 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retreg2Q6NS82 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retreg2Q6NS82 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Retreg2Q6NS82 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retreg2Q6NS82 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retreg2Q6NS82 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retreg2Q6NS82 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retreg2Q6NS82 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Retreg2Q6NS82 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Retreg2Q6NS82 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms