Protein–RNA interactions for Protein: Q6DID3

Scaf8, Protein SCAF8, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf8Q6DID3 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC19.21■□□□□ 0.67
Scaf8Q6DID3 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Scaf8Q6DID3 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC19.21■□□□□ 0.67
Scaf8Q6DID3 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Scaf8Q6DID3 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Scaf8Q6DID3 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Scaf8Q6DID3 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Scaf8Q6DID3 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Scaf8Q6DID3 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Scaf8Q6DID3 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Scaf8Q6DID3 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Scaf8Q6DID3 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC19.21■□□□□ 0.67
Scaf8Q6DID3 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Scaf8Q6DID3 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Scaf8Q6DID3 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Scaf8Q6DID3 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Scaf8Q6DID3 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.66
Scaf8Q6DID3 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Scaf8Q6DID3 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Scaf8Q6DID3 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Scaf8Q6DID3 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Scaf8Q6DID3 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Scaf8Q6DID3 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Scaf8Q6DID3 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Scaf8Q6DID3 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Scaf8Q6DID3 Gm15920-201ENSMUST00000118998 402 ntBASIC19.2■□□□□ 0.66
Scaf8Q6DID3 Gm12497-201ENSMUST00000138778 237 ntBASIC19.2■□□□□ 0.66
Scaf8Q6DID3 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC19.2■□□□□ 0.66
Scaf8Q6DID3 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Scaf8Q6DID3 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC19.2■□□□□ 0.66
Scaf8Q6DID3 AC159106.1-201ENSMUST00000224421 690 ntBASIC19.2■□□□□ 0.66
Scaf8Q6DID3 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Scaf8Q6DID3 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Scaf8Q6DID3 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Scaf8Q6DID3 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Scaf8Q6DID3 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Scaf8Q6DID3 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Scaf8Q6DID3 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Scaf8Q6DID3 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Scaf8Q6DID3 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Scaf8Q6DID3 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Scaf8Q6DID3 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC19.2■□□□□ 0.66
Scaf8Q6DID3 Fcho2-208ENSMUST00000224992 2964 ntBASIC19.2■□□□□ 0.66
Scaf8Q6DID3 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Scaf8Q6DID3 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC19.19■□□□□ 0.66
Scaf8Q6DID3 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC19.19■□□□□ 0.66
Scaf8Q6DID3 Gm8655-201ENSMUST00000221159 852 ntBASIC19.19■□□□□ 0.66
Scaf8Q6DID3 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Scaf8Q6DID3 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC19.19■□□□□ 0.66
Scaf8Q6DID3 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Scaf8Q6DID3 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Scaf8Q6DID3 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Scaf8Q6DID3 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
Scaf8Q6DID3 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Scaf8Q6DID3 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC19.18■□□□□ 0.66
Scaf8Q6DID3 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Scaf8Q6DID3 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Scaf8Q6DID3 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
Scaf8Q6DID3 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Scaf8Q6DID3 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Scaf8Q6DID3 Gm8349-201ENSMUST00000182720 1003 ntBASIC19.18■□□□□ 0.66
Scaf8Q6DID3 AC139382.1-201ENSMUST00000221402 498 ntBASIC19.18■□□□□ 0.66
Scaf8Q6DID3 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Scaf8Q6DID3 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Scaf8Q6DID3 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Scaf8Q6DID3 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Scaf8Q6DID3 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Scaf8Q6DID3 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Scaf8Q6DID3 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.18■□□□□ 0.66
Scaf8Q6DID3 Gm16499-203ENSMUST00000204633 2177 ntBASIC19.17■□□□□ 0.66
Scaf8Q6DID3 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.17■□□□□ 0.66
Scaf8Q6DID3 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Scaf8Q6DID3 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Scaf8Q6DID3 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
Scaf8Q6DID3 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Scaf8Q6DID3 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC19.17■□□□□ 0.66
Scaf8Q6DID3 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Scaf8Q6DID3 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC19.17■□□□□ 0.66
Scaf8Q6DID3 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Scaf8Q6DID3 Gm7229-201ENSMUST00000214719 1007 ntBASIC19.17■□□□□ 0.66
Scaf8Q6DID3 Gm15500-202ENSMUST00000071641 1019 ntBASIC19.17■□□□□ 0.66
Scaf8Q6DID3 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Scaf8Q6DID3 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Scaf8Q6DID3 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Scaf8Q6DID3 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.17■□□□□ 0.66
Scaf8Q6DID3 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Scaf8Q6DID3 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Scaf8Q6DID3 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Scaf8Q6DID3 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Scaf8Q6DID3 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Scaf8Q6DID3 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Scaf8Q6DID3 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scaf8Q6DID3 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scaf8Q6DID3 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC19.16■□□□□ 0.66
Scaf8Q6DID3 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC19.16■□□□□ 0.66
Scaf8Q6DID3 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC19.16■□□□□ 0.66
Scaf8Q6DID3 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC19.16■□□□□ 0.66
Scaf8Q6DID3 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scaf8Q6DID3 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scaf8Q6DID3 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms