Protein–RNA interactions for Protein: Q6DD96

Pcdhga7, Protocadherin gamma subfamily A, 7, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga7Q6DD96 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhga7Q6DD96 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Pcdhga7Q6DD96 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhga7Q6DD96 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhga7Q6DD96 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhga7Q6DD96 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Pcdhga7Q6DD96 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhga7Q6DD96 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhga7Q6DD96 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhga7Q6DD96 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC16.02■□□□□ 0.16
Pcdhga7Q6DD96 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhga7Q6DD96 Arhgef4-208ENSMUST00000211073 171 ntBASIC16.02■□□□□ 0.16
Pcdhga7Q6DD96 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhga7Q6DD96 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhga7Q6DD96 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhga7Q6DD96 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhga7Q6DD96 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Pcdhga7Q6DD96 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdhga7Q6DD96 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdhga7Q6DD96 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdhga7Q6DD96 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.15
Pcdhga7Q6DD96 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhga7Q6DD96 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhga7Q6DD96 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
Pcdhga7Q6DD96 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhga7Q6DD96 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Pcdhga7Q6DD96 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhga7Q6DD96 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhga7Q6DD96 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC16.01■□□□□ 0.15
Pcdhga7Q6DD96 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC16.01■□□□□ 0.15
Pcdhga7Q6DD96 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC16.01■□□□□ 0.15
Pcdhga7Q6DD96 Gm21814-202ENSMUST00000203277 873 ntBASIC16.01■□□□□ 0.15
Pcdhga7Q6DD96 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhga7Q6DD96 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Pcdhga7Q6DD96 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Pcdhga7Q6DD96 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Pcdhga7Q6DD96 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
Pcdhga7Q6DD96 AC154855.1-201ENSMUST00000227353 1458 ntBASIC16.01■□□□□ 0.15
Pcdhga7Q6DD96 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhga7Q6DD96 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhga7Q6DD96 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhga7Q6DD96 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhga7Q6DD96 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhga7Q6DD96 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhga7Q6DD96 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhga7Q6DD96 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC16■□□□□ 0.15
Pcdhga7Q6DD96 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhga7Q6DD96 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC16■□□□□ 0.15
Pcdhga7Q6DD96 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhga7Q6DD96 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhga7Q6DD96 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhga7Q6DD96 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhga7Q6DD96 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhga7Q6DD96 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhga7Q6DD96 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC16■□□□□ 0.15
Pcdhga7Q6DD96 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhga7Q6DD96 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhga7Q6DD96 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC16■□□□□ 0.15
Pcdhga7Q6DD96 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhga7Q6DD96 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhga7Q6DD96 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhga7Q6DD96 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC16■□□□□ 0.15
Pcdhga7Q6DD96 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhga7Q6DD96 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Pcdhga7Q6DD96 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhga7Q6DD96 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhga7Q6DD96 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhga7Q6DD96 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhga7Q6DD96 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhga7Q6DD96 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Pcdhga7Q6DD96 Mir5122-201ENSMUST00000175004 89 ntBASIC15.99■□□□□ 0.15
Pcdhga7Q6DD96 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhga7Q6DD96 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhga7Q6DD96 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhga7Q6DD96 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhga7Q6DD96 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhga7Q6DD96 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhga7Q6DD96 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhga7Q6DD96 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Pcdhga7Q6DD96 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC15.99■□□□□ 0.15
Pcdhga7Q6DD96 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhga7Q6DD96 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC15.99■□□□□ 0.15
Pcdhga7Q6DD96 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Pcdhga7Q6DD96 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Pcdhga7Q6DD96 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhga7Q6DD96 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhga7Q6DD96 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Pcdhga7Q6DD96 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhga7Q6DD96 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC15.98■□□□□ 0.15
Pcdhga7Q6DD96 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhga7Q6DD96 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC15.98■□□□□ 0.15
Pcdhga7Q6DD96 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhga7Q6DD96 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhga7Q6DD96 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhga7Q6DD96 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Pcdhga7Q6DD96 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC15.98■□□□□ 0.15
Pcdhga7Q6DD96 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhga7Q6DD96 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Pcdhga7Q6DD96 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhga7Q6DD96 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms