Protein–RNA interactions for Protein: Q61382

Traf4, TNF receptor-associated factor 4, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf4Q61382 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Traf4Q61382 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Traf4Q61382 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Traf4Q61382 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Traf4Q61382 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Traf4Q61382 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Traf4Q61382 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Traf4Q61382 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC14.64□□□□□ -0.07
Traf4Q61382 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Traf4Q61382 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Traf4Q61382 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
Traf4Q61382 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Traf4Q61382 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Traf4Q61382 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Traf4Q61382 Gm45212-201ENSMUST00000205831 3403 ntBASIC14.64□□□□□ -0.07
Traf4Q61382 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Traf4Q61382 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Traf4Q61382 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Traf4Q61382 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Traf4Q61382 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Traf4Q61382 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Traf4Q61382 Il3ra-202ENSMUST00000223589 738 ntBASIC14.64□□□□□ -0.07
Traf4Q61382 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Traf4Q61382 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Traf4Q61382 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Traf4Q61382 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Traf4Q61382 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
Traf4Q61382 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Traf4Q61382 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Traf4Q61382 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Traf4Q61382 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Traf4Q61382 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Traf4Q61382 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Traf4Q61382 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Traf4Q61382 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Traf4Q61382 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Traf4Q61382 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Traf4Q61382 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Traf4Q61382 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Traf4Q61382 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Traf4Q61382 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Traf4Q61382 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Traf4Q61382 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Traf4Q61382 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Traf4Q61382 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Traf4Q61382 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Traf4Q61382 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Traf4Q61382 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Traf4Q61382 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC14.63□□□□□ -0.07
Traf4Q61382 Gm25016-201ENSMUST00000158399 131 ntBASIC14.63□□□□□ -0.07
Traf4Q61382 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Traf4Q61382 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC14.63□□□□□ -0.07
Traf4Q61382 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Traf4Q61382 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Traf4Q61382 Gm7370-201ENSMUST00000219471 767 ntBASIC14.63□□□□□ -0.07
Traf4Q61382 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Traf4Q61382 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Traf4Q61382 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Traf4Q61382 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Traf4Q61382 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Traf4Q61382 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Traf4Q61382 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Traf4Q61382 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Traf4Q61382 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Traf4Q61382 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Traf4Q61382 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Traf4Q61382 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Traf4Q61382 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Traf4Q61382 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC14.63□□□□□ -0.07
Traf4Q61382 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Traf4Q61382 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Traf4Q61382 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Traf4Q61382 Gm37374-201ENSMUST00000194954 1829 ntBASIC14.62□□□□□ -0.07
Traf4Q61382 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Traf4Q61382 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Traf4Q61382 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Traf4Q61382 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC14.62□□□□□ -0.07
Traf4Q61382 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Traf4Q61382 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Traf4Q61382 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Traf4Q61382 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
Traf4Q61382 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Traf4Q61382 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Traf4Q61382 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Traf4Q61382 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Traf4Q61382 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Traf4Q61382 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC14.62□□□□□ -0.07
Traf4Q61382 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Traf4Q61382 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Traf4Q61382 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Traf4Q61382 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Traf4Q61382 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Traf4Q61382 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Traf4Q61382 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Traf4Q61382 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC14.61□□□□□ -0.07
Traf4Q61382 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Traf4Q61382 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Traf4Q61382 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Traf4Q61382 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Traf4Q61382 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms