Protein–RNA interactions for Protein: Q5U430

Ubr3, E3 ubiquitin-protein ligase UBR3, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3Q5U430 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ubr3Q5U430 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ubr3Q5U430 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC19.94■□□□□ 0.78
Ubr3Q5U430 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ubr3Q5U430 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Ubr3Q5U430 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC19.93■□□□□ 0.78
Ubr3Q5U430 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ubr3Q5U430 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Ubr3Q5U430 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Ubr3Q5U430 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC19.93■□□□□ 0.78
Ubr3Q5U430 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC19.93■□□□□ 0.78
Ubr3Q5U430 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Ubr3Q5U430 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC19.93■□□□□ 0.78
Ubr3Q5U430 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ubr3Q5U430 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Ubr3Q5U430 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ubr3Q5U430 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ubr3Q5U430 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ubr3Q5U430 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ubr3Q5U430 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Ubr3Q5U430 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ubr3Q5U430 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC19.93■□□□□ 0.78
Ubr3Q5U430 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ubr3Q5U430 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC19.92■□□□□ 0.78
Ubr3Q5U430 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ubr3Q5U430 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC19.92■□□□□ 0.78
Ubr3Q5U430 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ubr3Q5U430 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC19.92■□□□□ 0.78
Ubr3Q5U430 Gm44335-201ENSMUST00000196879 141 ntBASIC19.92■□□□□ 0.78
Ubr3Q5U430 Gm44297-201ENSMUST00000198304 141 ntBASIC19.92■□□□□ 0.78
Ubr3Q5U430 Gm44346-201ENSMUST00000198851 141 ntBASIC19.92■□□□□ 0.78
Ubr3Q5U430 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ubr3Q5U430 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Ubr3Q5U430 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ubr3Q5U430 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Ubr3Q5U430 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Ubr3Q5U430 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ubr3Q5U430 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ubr3Q5U430 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Ubr3Q5U430 AC155252.2-201ENSMUST00000226946 680 ntBASIC19.92■□□□□ 0.78
Ubr3Q5U430 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ubr3Q5U430 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Ubr3Q5U430 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ubr3Q5U430 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ubr3Q5U430 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Ubr3Q5U430 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ubr3Q5U430 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ubr3Q5U430 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Ubr3Q5U430 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ubr3Q5U430 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ubr3Q5U430 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ubr3Q5U430 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ubr3Q5U430 Gm8344-201ENSMUST00000119813 856 ntBASIC19.91■□□□□ 0.78
Ubr3Q5U430 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC19.91■□□□□ 0.78
Ubr3Q5U430 Gm9682-201ENSMUST00000197505 556 ntBASIC19.91■□□□□ 0.78
Ubr3Q5U430 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC19.91■□□□□ 0.78
Ubr3Q5U430 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ubr3Q5U430 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ubr3Q5U430 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ubr3Q5U430 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ubr3Q5U430 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ubr3Q5U430 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ubr3Q5U430 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ubr3Q5U430 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ubr3Q5U430 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ubr3Q5U430 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ubr3Q5U430 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ubr3Q5U430 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ubr3Q5U430 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ubr3Q5U430 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC19.9■□□□□ 0.78
Ubr3Q5U430 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ubr3Q5U430 Gm43125-201ENSMUST00000201724 730 ntBASIC19.9■□□□□ 0.78
Ubr3Q5U430 Gm45612-201ENSMUST00000211320 160 ntBASIC19.9■□□□□ 0.78
Ubr3Q5U430 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ubr3Q5U430 AC093926.2-201ENSMUST00000214468 1228 ntBASIC19.9■□□□□ 0.78
Ubr3Q5U430 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ubr3Q5U430 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC19.9■□□□□ 0.78
Ubr3Q5U430 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ubr3Q5U430 Gm37519-201ENSMUST00000191687 2210 ntBASIC19.9■□□□□ 0.78
Ubr3Q5U430 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
Ubr3Q5U430 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ubr3Q5U430 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Ubr3Q5U430 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Ubr3Q5U430 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ubr3Q5U430 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ubr3Q5U430 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
Ubr3Q5U430 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
Ubr3Q5U430 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ubr3Q5U430 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ubr3Q5U430 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ubr3Q5U430 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Ubr3Q5U430 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Ubr3Q5U430 Gm13332-201ENSMUST00000120451 1398 ntBASIC19.89■□□□□ 0.77
Ubr3Q5U430 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ubr3Q5U430 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Ubr3Q5U430 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC19.89■□□□□ 0.77
Ubr3Q5U430 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ubr3Q5U430 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ubr3Q5U430 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
Ubr3Q5U430 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms