Protein–RNA interactions for Protein: Q5R1I4

Trav6-2, T cell receptor alpha variable 6-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-2Q5R1I4 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6-2Q5R1I4 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6-2Q5R1I4 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Trav6-2Q5R1I4 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6-2Q5R1I4 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6-2Q5R1I4 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Trav6-2Q5R1I4 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6-2Q5R1I4 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC14.48□□□□□ -0.09
Trav6-2Q5R1I4 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6-2Q5R1I4 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6-2Q5R1I4 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
Trav6-2Q5R1I4 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Trav6-2Q5R1I4 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Trav6-2Q5R1I4 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6-2Q5R1I4 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC14.48□□□□□ -0.09
Trav6-2Q5R1I4 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC14.48□□□□□ -0.09
Trav6-2Q5R1I4 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6-2Q5R1I4 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6-2Q5R1I4 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6-2Q5R1I4 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6-2Q5R1I4 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6-2Q5R1I4 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC14.48□□□□□ -0.09
Trav6-2Q5R1I4 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6-2Q5R1I4 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6-2Q5R1I4 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6-2Q5R1I4 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6-2Q5R1I4 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6-2Q5R1I4 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6-2Q5R1I4 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6-2Q5R1I4 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6-2Q5R1I4 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC14.47□□□□□ -0.09
Trav6-2Q5R1I4 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
Trav6-2Q5R1I4 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Trav6-2Q5R1I4 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6-2Q5R1I4 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC14.47□□□□□ -0.09
Trav6-2Q5R1I4 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC14.47□□□□□ -0.09
Trav6-2Q5R1I4 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6-2Q5R1I4 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6-2Q5R1I4 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
Trav6-2Q5R1I4 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6-2Q5R1I4 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6-2Q5R1I4 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6-2Q5R1I4 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6-2Q5R1I4 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Trav6-2Q5R1I4 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6-2Q5R1I4 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6-2Q5R1I4 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6-2Q5R1I4 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6-2Q5R1I4 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6-2Q5R1I4 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6-2Q5R1I4 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6-2Q5R1I4 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6-2Q5R1I4 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav6-2Q5R1I4 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trav6-2Q5R1I4 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav6-2Q5R1I4 Gm37519-201ENSMUST00000191687 2210 ntBASIC14.46□□□□□ -0.09
Trav6-2Q5R1I4 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav6-2Q5R1I4 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav6-2Q5R1I4 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav6-2Q5R1I4 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav6-2Q5R1I4 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav6-2Q5R1I4 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC14.46□□□□□ -0.09
Trav6-2Q5R1I4 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav6-2Q5R1I4 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav6-2Q5R1I4 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC14.46□□□□□ -0.09
Trav6-2Q5R1I4 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC14.46□□□□□ -0.09
Trav6-2Q5R1I4 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav6-2Q5R1I4 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC14.46□□□□□ -0.09
Trav6-2Q5R1I4 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC14.46□□□□□ -0.09
Trav6-2Q5R1I4 Gm2651-201ENSMUST00000203560 838 ntBASIC14.46□□□□□ -0.09
Trav6-2Q5R1I4 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav6-2Q5R1I4 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Trav6-2Q5R1I4 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav6-2Q5R1I4 Gm6296-201ENSMUST00000222599 943 ntBASIC14.46□□□□□ -0.09
Trav6-2Q5R1I4 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav6-2Q5R1I4 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav6-2Q5R1I4 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav6-2Q5R1I4 Gm18856-201ENSMUST00000178096 1374 ntBASIC14.46□□□□□ -0.1
Trav6-2Q5R1I4 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav6-2Q5R1I4 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav6-2Q5R1I4 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav6-2Q5R1I4 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6-2Q5R1I4 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6-2Q5R1I4 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6-2Q5R1I4 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6-2Q5R1I4 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6-2Q5R1I4 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6-2Q5R1I4 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6-2Q5R1I4 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC14.45□□□□□ -0.1
Trav6-2Q5R1I4 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Trav6-2Q5R1I4 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC14.45□□□□□ -0.1
Trav6-2Q5R1I4 Gm7862-201ENSMUST00000121461 292 ntBASIC14.45□□□□□ -0.1
Trav6-2Q5R1I4 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6-2Q5R1I4 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6-2Q5R1I4 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6-2Q5R1I4 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC14.45□□□□□ -0.1
Trav6-2Q5R1I4 AW822252-206ENSMUST00000208904 237 ntBASIC14.45□□□□□ -0.1
Trav6-2Q5R1I4 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC14.45□□□□□ -0.1
Trav6-2Q5R1I4 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6-2Q5R1I4 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms