Protein–RNA interactions for Protein: Q5R1I1

Trav7d-3, T cell receptor alpha variable 7-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-3Q5R1I1 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav7d-3Q5R1I1 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav7d-3Q5R1I1 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav7d-3Q5R1I1 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav7d-3Q5R1I1 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav7d-3Q5R1I1 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav7d-3Q5R1I1 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav7d-3Q5R1I1 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav7d-3Q5R1I1 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav7d-3Q5R1I1 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Trav7d-3Q5R1I1 Gm18958-201ENSMUST00000174258 762 ntBASIC12.14□□□□□ -0.47
Trav7d-3Q5R1I1 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Trav7d-3Q5R1I1 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC12.14□□□□□ -0.47
Trav7d-3Q5R1I1 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC12.14□□□□□ -0.47
Trav7d-3Q5R1I1 AC120002.2-201ENSMUST00000220205 773 ntBASIC12.14□□□□□ -0.47
Trav7d-3Q5R1I1 CT025689.6-201ENSMUST00000224991 1104 ntBASIC12.14□□□□□ -0.47
Trav7d-3Q5R1I1 Timm23-208ENSMUST00000226683 750 ntBASIC12.14□□□□□ -0.47
Trav7d-3Q5R1I1 AC154649.1-201ENSMUST00000227392 384 ntBASIC12.14□□□□□ -0.47
Trav7d-3Q5R1I1 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav7d-3Q5R1I1 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Trav7d-3Q5R1I1 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav7d-3Q5R1I1 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav7d-3Q5R1I1 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav7d-3Q5R1I1 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav7d-3Q5R1I1 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav7d-3Q5R1I1 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav7d-3Q5R1I1 Gm37812-201ENSMUST00000195216 2475 ntBASIC12.14□□□□□ -0.47
Trav7d-3Q5R1I1 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav7d-3Q5R1I1 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC12.14□□□□□ -0.47
Trav7d-3Q5R1I1 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav7d-3Q5R1I1 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav7d-3Q5R1I1 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav7d-3Q5R1I1 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav7d-3Q5R1I1 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav7d-3Q5R1I1 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Trav7d-3Q5R1I1 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav7d-3Q5R1I1 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav7d-3Q5R1I1 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC12.13□□□□□ -0.47
Trav7d-3Q5R1I1 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC12.13□□□□□ -0.47
Trav7d-3Q5R1I1 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav7d-3Q5R1I1 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav7d-3Q5R1I1 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav7d-3Q5R1I1 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Trav7d-3Q5R1I1 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav7d-3Q5R1I1 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav7d-3Q5R1I1 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav7d-3Q5R1I1 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav7d-3Q5R1I1 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav7d-3Q5R1I1 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav7d-3Q5R1I1 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC12.13□□□□□ -0.47
Trav7d-3Q5R1I1 AC175538.1-201ENSMUST00000225343 1269 ntBASIC12.13□□□□□ -0.47
Trav7d-3Q5R1I1 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav7d-3Q5R1I1 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav7d-3Q5R1I1 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav7d-3Q5R1I1 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav7d-3Q5R1I1 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav7d-3Q5R1I1 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav7d-3Q5R1I1 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC12.13□□□□□ -0.47
Trav7d-3Q5R1I1 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav7d-3Q5R1I1 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav7d-3Q5R1I1 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav7d-3Q5R1I1 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav7d-3Q5R1I1 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav7d-3Q5R1I1 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav7d-3Q5R1I1 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav7d-3Q5R1I1 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav7d-3Q5R1I1 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav7d-3Q5R1I1 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav7d-3Q5R1I1 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav7d-3Q5R1I1 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav7d-3Q5R1I1 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav7d-3Q5R1I1 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav7d-3Q5R1I1 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav7d-3Q5R1I1 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav7d-3Q5R1I1 AL590614.2-201ENSMUST00000225374 1937 ntBASIC12.12□□□□□ -0.47
Trav7d-3Q5R1I1 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Trav7d-3Q5R1I1 Gm13168-201ENSMUST00000121771 632 ntBASIC12.12□□□□□ -0.47
Trav7d-3Q5R1I1 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
Trav7d-3Q5R1I1 Gm8520-201ENSMUST00000186517 868 ntBASIC12.12□□□□□ -0.47
Trav7d-3Q5R1I1 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav7d-3Q5R1I1 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav7d-3Q5R1I1 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Trav7d-3Q5R1I1 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC12.12□□□□□ -0.47
Trav7d-3Q5R1I1 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Trav7d-3Q5R1I1 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav7d-3Q5R1I1 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav7d-3Q5R1I1 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav7d-3Q5R1I1 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav7d-3Q5R1I1 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav7d-3Q5R1I1 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Trav7d-3Q5R1I1 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav7d-3Q5R1I1 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav7d-3Q5R1I1 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav7d-3Q5R1I1 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav7d-3Q5R1I1 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Trav7d-3Q5R1I1 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav7d-3Q5R1I1 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav7d-3Q5R1I1 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav7d-3Q5R1I1 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Trav7d-3Q5R1I1 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms