Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Gm10138-203ENSMUST00000206952 366 ntBASIC13.57□□□□□ -0.24
Trav8d-1Q5R1H8 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav8d-1Q5R1H8 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav8d-1Q5R1H8 Gm16011-201ENSMUST00000121567 2662 ntBASIC13.57□□□□□ -0.24
Trav8d-1Q5R1H8 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav8d-1Q5R1H8 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav8d-1Q5R1H8 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav8d-1Q5R1H8 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC13.57□□□□□ -0.24
Trav8d-1Q5R1H8 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
Trav8d-1Q5R1H8 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC13.57□□□□□ -0.24
Trav8d-1Q5R1H8 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav8d-1Q5R1H8 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav8d-1Q5R1H8 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav8d-1Q5R1H8 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Trav8d-1Q5R1H8 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav8d-1Q5R1H8 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav8d-1Q5R1H8 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav8d-1Q5R1H8 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav8d-1Q5R1H8 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav8d-1Q5R1H8 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav8d-1Q5R1H8 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav8d-1Q5R1H8 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav8d-1Q5R1H8 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav8d-1Q5R1H8 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav8d-1Q5R1H8 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav8d-1Q5R1H8 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC13.56□□□□□ -0.24
Trav8d-1Q5R1H8 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav8d-1Q5R1H8 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC13.56□□□□□ -0.24
Trav8d-1Q5R1H8 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC13.56□□□□□ -0.24
Trav8d-1Q5R1H8 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav8d-1Q5R1H8 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Trav8d-1Q5R1H8 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav8d-1Q5R1H8 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Trav8d-1Q5R1H8 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav8d-1Q5R1H8 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Trav8d-1Q5R1H8 Nrn1-203ENSMUST00000223611 1443 ntBASIC13.56□□□□□ -0.24
Trav8d-1Q5R1H8 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav8d-1Q5R1H8 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC13.55□□□□□ -0.24
Trav8d-1Q5R1H8 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav8d-1Q5R1H8 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav8d-1Q5R1H8 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav8d-1Q5R1H8 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Trav8d-1Q5R1H8 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav8d-1Q5R1H8 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC13.55□□□□□ -0.24
Trav8d-1Q5R1H8 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav8d-1Q5R1H8 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav8d-1Q5R1H8 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav8d-1Q5R1H8 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav8d-1Q5R1H8 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav8d-1Q5R1H8 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav8d-1Q5R1H8 AC163280.1-201ENSMUST00000228194 1100 ntBASIC13.55□□□□□ -0.24
Trav8d-1Q5R1H8 Gm10812-201ENSMUST00000099864 546 ntBASIC13.55□□□□□ -0.24
Trav8d-1Q5R1H8 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Trav8d-1Q5R1H8 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav8d-1Q5R1H8 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav8d-1Q5R1H8 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav8d-1Q5R1H8 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav8d-1Q5R1H8 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav8d-1Q5R1H8 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav8d-1Q5R1H8 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Trav8d-1Q5R1H8 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav8d-1Q5R1H8 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav8d-1Q5R1H8 AC108858.1-201ENSMUST00000228461 1498 ntBASIC13.55□□□□□ -0.24
Trav8d-1Q5R1H8 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
Trav8d-1Q5R1H8 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav8d-1Q5R1H8 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav8d-1Q5R1H8 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC13.54□□□□□ -0.24
Trav8d-1Q5R1H8 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
Trav8d-1Q5R1H8 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav8d-1Q5R1H8 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Trav8d-1Q5R1H8 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav8d-1Q5R1H8 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC13.54□□□□□ -0.24
Trav8d-1Q5R1H8 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav8d-1Q5R1H8 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC13.54□□□□□ -0.24
Trav8d-1Q5R1H8 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav8d-1Q5R1H8 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav8d-1Q5R1H8 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC13.54□□□□□ -0.24
Trav8d-1Q5R1H8 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC13.54□□□□□ -0.24
Trav8d-1Q5R1H8 Gm5643-201ENSMUST00000117081 966 ntBASIC13.54□□□□□ -0.24
Trav8d-1Q5R1H8 Gm15378-201ENSMUST00000121894 207 ntBASIC13.54□□□□□ -0.24
Trav8d-1Q5R1H8 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav8d-1Q5R1H8 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC13.54□□□□□ -0.24
Trav8d-1Q5R1H8 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav8d-1Q5R1H8 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav8d-1Q5R1H8 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC13.54□□□□□ -0.24
Trav8d-1Q5R1H8 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav8d-1Q5R1H8 Tfap2a-209ENSMUST00000225180 1828 ntBASIC13.54□□□□□ -0.24
Trav8d-1Q5R1H8 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav8d-1Q5R1H8 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav8d-1Q5R1H8 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav8d-1Q5R1H8 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
Trav8d-1Q5R1H8 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav8d-1Q5R1H8 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav8d-1Q5R1H8 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
Trav8d-1Q5R1H8 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav8d-1Q5R1H8 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC13.54□□□□□ -0.24
Trav8d-1Q5R1H8 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav8d-1Q5R1H8 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav8d-1Q5R1H8 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav8d-1Q5R1H8 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms