Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav3-3Q5R1C3 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Trav3-3Q5R1C3 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC12.46□□□□□ -0.42
Trav3-3Q5R1C3 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav3-3Q5R1C3 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC12.46□□□□□ -0.42
Trav3-3Q5R1C3 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav3-3Q5R1C3 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav3-3Q5R1C3 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav3-3Q5R1C3 Gm13534-201ENSMUST00000121169 513 ntBASIC12.45□□□□□ -0.42
Trav3-3Q5R1C3 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Trav3-3Q5R1C3 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Trav3-3Q5R1C3 AC107452.1-201ENSMUST00000227963 481 ntBASIC12.45□□□□□ -0.42
Trav3-3Q5R1C3 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav3-3Q5R1C3 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Trav3-3Q5R1C3 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav3-3Q5R1C3 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Trav3-3Q5R1C3 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav3-3Q5R1C3 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav3-3Q5R1C3 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
Trav3-3Q5R1C3 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav3-3Q5R1C3 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav3-3Q5R1C3 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC12.45□□□□□ -0.42
Trav3-3Q5R1C3 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Trav3-3Q5R1C3 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Trav3-3Q5R1C3 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Trav3-3Q5R1C3 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav3-3Q5R1C3 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Trav3-3Q5R1C3 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC12.44□□□□□ -0.42
Trav3-3Q5R1C3 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Trav3-3Q5R1C3 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav3-3Q5R1C3 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav3-3Q5R1C3 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav3-3Q5R1C3 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav3-3Q5R1C3 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav3-3Q5R1C3 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC12.44□□□□□ -0.42
Trav3-3Q5R1C3 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC12.44□□□□□ -0.42
Trav3-3Q5R1C3 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav3-3Q5R1C3 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav3-3Q5R1C3 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav3-3Q5R1C3 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav3-3Q5R1C3 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC12.44□□□□□ -0.42
Trav3-3Q5R1C3 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Trav3-3Q5R1C3 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav3-3Q5R1C3 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Trav3-3Q5R1C3 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav3-3Q5R1C3 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav3-3Q5R1C3 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav3-3Q5R1C3 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav3-3Q5R1C3 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC12.44□□□□□ -0.42
Trav3-3Q5R1C3 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC12.44□□□□□ -0.42
Trav3-3Q5R1C3 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav3-3Q5R1C3 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Trav3-3Q5R1C3 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC12.44□□□□□ -0.42
Trav3-3Q5R1C3 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav3-3Q5R1C3 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC12.44□□□□□ -0.42
Trav3-3Q5R1C3 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav3-3Q5R1C3 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav3-3Q5R1C3 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav3-3Q5R1C3 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav3-3Q5R1C3 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav3-3Q5R1C3 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav3-3Q5R1C3 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav3-3Q5R1C3 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
Trav3-3Q5R1C3 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav3-3Q5R1C3 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav3-3Q5R1C3 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
Trav3-3Q5R1C3 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav3-3Q5R1C3 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav3-3Q5R1C3 Gm11620-201ENSMUST00000118770 1845 ntBASIC12.44□□□□□ -0.42
Trav3-3Q5R1C3 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav3-3Q5R1C3 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Trav3-3Q5R1C3 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav3-3Q5R1C3 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav3-3Q5R1C3 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Trav3-3Q5R1C3 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav3-3Q5R1C3 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav3-3Q5R1C3 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav3-3Q5R1C3 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Trav3-3Q5R1C3 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav3-3Q5R1C3 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav3-3Q5R1C3 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav3-3Q5R1C3 Gm37019-201ENSMUST00000192133 2134 ntBASIC12.43□□□□□ -0.42
Trav3-3Q5R1C3 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC12.43□□□□□ -0.42
Trav3-3Q5R1C3 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC12.43□□□□□ -0.42
Trav3-3Q5R1C3 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav3-3Q5R1C3 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC12.43□□□□□ -0.42
Trav3-3Q5R1C3 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav3-3Q5R1C3 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav3-3Q5R1C3 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav3-3Q5R1C3 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav3-3Q5R1C3 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav3-3Q5R1C3 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC12.43□□□□□ -0.42
Trav3-3Q5R1C3 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC12.43□□□□□ -0.42
Trav3-3Q5R1C3 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Trav3-3Q5R1C3 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC12.43□□□□□ -0.42
Trav3-3Q5R1C3 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav3-3Q5R1C3 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav3-3Q5R1C3 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav3-3Q5R1C3 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav3-3Q5R1C3 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms