Protein–RNA interactions for Protein: Q5NCP0

Rnf43, E3 ubiquitin-protein ligase RNF43, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43Q5NCP0 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf43Q5NCP0 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Rnf43Q5NCP0 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf43Q5NCP0 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Rnf43Q5NCP0 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf43Q5NCP0 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC16.78■□□□□ 0.28
Rnf43Q5NCP0 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf43Q5NCP0 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf43Q5NCP0 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Rnf43Q5NCP0 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf43Q5NCP0 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf43Q5NCP0 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf43Q5NCP0 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf43Q5NCP0 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf43Q5NCP0 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf43Q5NCP0 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf43Q5NCP0 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf43Q5NCP0 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Rnf43Q5NCP0 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Rnf43Q5NCP0 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rnf43Q5NCP0 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rnf43Q5NCP0 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rnf43Q5NCP0 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Rnf43Q5NCP0 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rnf43Q5NCP0 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Rnf43Q5NCP0 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rnf43Q5NCP0 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rnf43Q5NCP0 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rnf43Q5NCP0 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Rnf43Q5NCP0 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rnf43Q5NCP0 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Rnf43Q5NCP0 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Rnf43Q5NCP0 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Rnf43Q5NCP0 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC16.77■□□□□ 0.28
Rnf43Q5NCP0 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC16.77■□□□□ 0.28
Rnf43Q5NCP0 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Rnf43Q5NCP0 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rnf43Q5NCP0 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rnf43Q5NCP0 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rnf43Q5NCP0 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rnf43Q5NCP0 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rnf43Q5NCP0 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rnf43Q5NCP0 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rnf43Q5NCP0 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Rnf43Q5NCP0 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rnf43Q5NCP0 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rnf43Q5NCP0 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rnf43Q5NCP0 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rnf43Q5NCP0 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC16.76■□□□□ 0.27
Rnf43Q5NCP0 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC16.76■□□□□ 0.27
Rnf43Q5NCP0 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rnf43Q5NCP0 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rnf43Q5NCP0 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rnf43Q5NCP0 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rnf43Q5NCP0 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rnf43Q5NCP0 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Rnf43Q5NCP0 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rnf43Q5NCP0 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rnf43Q5NCP0 Gm18856-201ENSMUST00000178096 1374 ntBASIC16.76■□□□□ 0.27
Rnf43Q5NCP0 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rnf43Q5NCP0 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rnf43Q5NCP0 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rnf43Q5NCP0 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rnf43Q5NCP0 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Rnf43Q5NCP0 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rnf43Q5NCP0 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC16.75■□□□□ 0.27
Rnf43Q5NCP0 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rnf43Q5NCP0 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rnf43Q5NCP0 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rnf43Q5NCP0 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Rnf43Q5NCP0 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC16.75■□□□□ 0.27
Rnf43Q5NCP0 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC16.75■□□□□ 0.27
Rnf43Q5NCP0 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rnf43Q5NCP0 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rnf43Q5NCP0 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Rnf43Q5NCP0 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rnf43Q5NCP0 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rnf43Q5NCP0 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rnf43Q5NCP0 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rnf43Q5NCP0 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rnf43Q5NCP0 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Rnf43Q5NCP0 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rnf43Q5NCP0 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rnf43Q5NCP0 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.74■□□□□ 0.27
Rnf43Q5NCP0 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rnf43Q5NCP0 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rnf43Q5NCP0 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rnf43Q5NCP0 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Rnf43Q5NCP0 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rnf43Q5NCP0 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Rnf43Q5NCP0 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC16.74■□□□□ 0.27
Rnf43Q5NCP0 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rnf43Q5NCP0 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rnf43Q5NCP0 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rnf43Q5NCP0 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rnf43Q5NCP0 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rnf43Q5NCP0 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rnf43Q5NCP0 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rnf43Q5NCP0 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rnf43Q5NCP0 Gm45412-201ENSMUST00000210217 2275 ntBASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms