Protein–RNA interactions for Protein: Q3UTQ8

Cdkl5, Cyclin-dependent kinase-like 5, mousemouse

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl5Q3UTQ8 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC19.13■□□□□ 0.65
Cdkl5Q3UTQ8 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Cdkl5Q3UTQ8 Gm21559-201ENSMUST00000220638 855 ntBASIC19.13■□□□□ 0.65
Cdkl5Q3UTQ8 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cdkl5Q3UTQ8 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cdkl5Q3UTQ8 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cdkl5Q3UTQ8 Gm8587-201ENSMUST00000076538 843 ntBASIC19.13■□□□□ 0.65
Cdkl5Q3UTQ8 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cdkl5Q3UTQ8 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cdkl5Q3UTQ8 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cdkl5Q3UTQ8 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cdkl5Q3UTQ8 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cdkl5Q3UTQ8 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Cdkl5Q3UTQ8 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Cdkl5Q3UTQ8 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cdkl5Q3UTQ8 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cdkl5Q3UTQ8 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cdkl5Q3UTQ8 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cdkl5Q3UTQ8 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cdkl5Q3UTQ8 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cdkl5Q3UTQ8 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Cdkl5Q3UTQ8 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Cdkl5Q3UTQ8 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Cdkl5Q3UTQ8 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cdkl5Q3UTQ8 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cdkl5Q3UTQ8 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Cdkl5Q3UTQ8 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cdkl5Q3UTQ8 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cdkl5Q3UTQ8 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cdkl5Q3UTQ8 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cdkl5Q3UTQ8 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cdkl5Q3UTQ8 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cdkl5Q3UTQ8 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Cdkl5Q3UTQ8 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cdkl5Q3UTQ8 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Cdkl5Q3UTQ8 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cdkl5Q3UTQ8 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cdkl5Q3UTQ8 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cdkl5Q3UTQ8 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Cdkl5Q3UTQ8 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Cdkl5Q3UTQ8 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Cdkl5Q3UTQ8 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Cdkl5Q3UTQ8 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cdkl5Q3UTQ8 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Cdkl5Q3UTQ8 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cdkl5Q3UTQ8 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Cdkl5Q3UTQ8 Gm9987-201ENSMUST00000069768 567 ntBASIC19.11■□□□□ 0.65
Cdkl5Q3UTQ8 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC19.11■□□□□ 0.65
Cdkl5Q3UTQ8 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cdkl5Q3UTQ8 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cdkl5Q3UTQ8 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cdkl5Q3UTQ8 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cdkl5Q3UTQ8 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cdkl5Q3UTQ8 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Cdkl5Q3UTQ8 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC19.1■□□□□ 0.65
Cdkl5Q3UTQ8 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cdkl5Q3UTQ8 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cdkl5Q3UTQ8 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cdkl5Q3UTQ8 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC19.1■□□□□ 0.65
Cdkl5Q3UTQ8 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Cdkl5Q3UTQ8 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cdkl5Q3UTQ8 Gm18032-201ENSMUST00000222541 538 ntBASIC19.1■□□□□ 0.65
Cdkl5Q3UTQ8 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cdkl5Q3UTQ8 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cdkl5Q3UTQ8 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cdkl5Q3UTQ8 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cdkl5Q3UTQ8 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Cdkl5Q3UTQ8 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Cdkl5Q3UTQ8 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Cdkl5Q3UTQ8 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Cdkl5Q3UTQ8 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Cdkl5Q3UTQ8 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cdkl5Q3UTQ8 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cdkl5Q3UTQ8 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cdkl5Q3UTQ8 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cdkl5Q3UTQ8 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Cdkl5Q3UTQ8 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cdkl5Q3UTQ8 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cdkl5Q3UTQ8 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cdkl5Q3UTQ8 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cdkl5Q3UTQ8 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
Cdkl5Q3UTQ8 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cdkl5Q3UTQ8 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Cdkl5Q3UTQ8 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Cdkl5Q3UTQ8 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Cdkl5Q3UTQ8 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cdkl5Q3UTQ8 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cdkl5Q3UTQ8 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Cdkl5Q3UTQ8 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cdkl5Q3UTQ8 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cdkl5Q3UTQ8 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Cdkl5Q3UTQ8 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cdkl5Q3UTQ8 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
Cdkl5Q3UTQ8 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Cdkl5Q3UTQ8 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cdkl5Q3UTQ8 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
Cdkl5Q3UTQ8 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Cdkl5Q3UTQ8 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Cdkl5Q3UTQ8 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC19.08■□□□□ 0.64
Cdkl5Q3UTQ8 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms