Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC14.31□□□□□ -0.12
Q3U1D9 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC14.31□□□□□ -0.12
Q3U1D9 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Q3U1D9 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Q3U1D9 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Q3U1D9 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Q3U1D9 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Q3U1D9 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Q3U1D9 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Q3U1D9 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Q3U1D9 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Q3U1D9 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Q3U1D9 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Q3U1D9 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Q3U1D9 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Q3U1D9 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Q3U1D9 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC14.31□□□□□ -0.12
Q3U1D9 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC14.31□□□□□ -0.12
Q3U1D9 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Q3U1D9 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Q3U1D9 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Q3U1D9 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Q3U1D9 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Q3U1D9 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Q3U1D9 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC14.31□□□□□ -0.12
Q3U1D9 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Q3U1D9 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Q3U1D9 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Q3U1D9 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Q3U1D9 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Q3U1D9 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Q3U1D9 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Q3U1D9 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC14.3□□□□□ -0.12
Q3U1D9 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Q3U1D9 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Q3U1D9 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC14.3□□□□□ -0.12
Q3U1D9 AC108846.1-201ENSMUST00000214531 513 ntBASIC14.3□□□□□ -0.12
Q3U1D9 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Q3U1D9 Birc2-201ENSMUST00000054878 378 ntBASIC14.3□□□□□ -0.12
Q3U1D9 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Q3U1D9 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Q3U1D9 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Q3U1D9 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Q3U1D9 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Q3U1D9 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Q3U1D9 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Q3U1D9 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Q3U1D9 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Q3U1D9 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Q3U1D9 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Q3U1D9 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Q3U1D9 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Q3U1D9 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Q3U1D9 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Q3U1D9 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Q3U1D9 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Q3U1D9 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Q3U1D9 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Q3U1D9 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
Q3U1D9 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Q3U1D9 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Q3U1D9 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Q3U1D9 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Q3U1D9 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Q3U1D9 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Q3U1D9 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Q3U1D9 AC153794.1-201ENSMUST00000169148 126 ntBASIC14.29□□□□□ -0.12
Q3U1D9 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC14.29□□□□□ -0.12
Q3U1D9 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC14.29□□□□□ -0.12
Q3U1D9 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC14.29□□□□□ -0.12
Q3U1D9 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Q3U1D9 Gm7461-201ENSMUST00000058918 827 ntBASIC14.29□□□□□ -0.12
Q3U1D9 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Q3U1D9 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Q3U1D9 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Q3U1D9 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Q3U1D9 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Q3U1D9 Gm11620-201ENSMUST00000118770 1845 ntBASIC14.29□□□□□ -0.12
Q3U1D9 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Q3U1D9 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC14.29□□□□□ -0.12
Q3U1D9 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Q3U1D9 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Q3U1D9 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Q3U1D9 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Q3U1D9 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Q3U1D9 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Q3U1D9 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Q3U1D9 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Q3U1D9 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Q3U1D9 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Q3U1D9 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC14.28□□□□□ -0.12
Q3U1D9 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Q3U1D9 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Q3U1D9 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Q3U1D9 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC14.28□□□□□ -0.12
Q3U1D9 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Q3U1D9 Gm43347-201ENSMUST00000200226 580 ntBASIC14.28□□□□□ -0.12
Q3U1D9 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC14.28□□□□□ -0.12
Q3U1D9 Gm34391-201ENSMUST00000203706 907 ntBASIC14.28□□□□□ -0.12
Q3U1D9 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms