Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim63Q38HM4 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim63Q38HM4 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim63Q38HM4 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Trim63Q38HM4 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim63Q38HM4 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC13.69□□□□□ -0.22
Trim63Q38HM4 Gm12366-201ENSMUST00000121722 873 ntBASIC13.69□□□□□ -0.22
Trim63Q38HM4 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC13.69□□□□□ -0.22
Trim63Q38HM4 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trim63Q38HM4 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trim63Q38HM4 Nsd1-203ENSMUST00000224156 1149 ntBASIC13.69□□□□□ -0.22
Trim63Q38HM4 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC13.69□□□□□ -0.22
Trim63Q38HM4 Gm5786-201ENSMUST00000085368 882 ntBASIC13.69□□□□□ -0.22
Trim63Q38HM4 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim63Q38HM4 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Trim63Q38HM4 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim63Q38HM4 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trim63Q38HM4 Gm37736-201ENSMUST00000193564 2802 ntBASIC13.69□□□□□ -0.22
Trim63Q38HM4 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim63Q38HM4 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim63Q38HM4 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim63Q38HM4 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim63Q38HM4 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Trim63Q38HM4 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Trim63Q38HM4 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim63Q38HM4 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim63Q38HM4 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim63Q38HM4 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim63Q38HM4 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim63Q38HM4 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim63Q38HM4 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.68□□□□□ -0.22
Trim63Q38HM4 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim63Q38HM4 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim63Q38HM4 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Trim63Q38HM4 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim63Q38HM4 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim63Q38HM4 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim63Q38HM4 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC13.68□□□□□ -0.22
Trim63Q38HM4 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim63Q38HM4 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Trim63Q38HM4 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim63Q38HM4 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC13.68□□□□□ -0.22
Trim63Q38HM4 Gm43072-201ENSMUST00000200283 1671 ntBASIC13.68□□□□□ -0.22
Trim63Q38HM4 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim63Q38HM4 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim63Q38HM4 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC13.68□□□□□ -0.22
Trim63Q38HM4 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim63Q38HM4 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Trim63Q38HM4 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trim63Q38HM4 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim63Q38HM4 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Trim63Q38HM4 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC13.68□□□□□ -0.22
Trim63Q38HM4 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim63Q38HM4 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim63Q38HM4 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim63Q38HM4 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Trim63Q38HM4 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trim63Q38HM4 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim63Q38HM4 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC13.67□□□□□ -0.22
Trim63Q38HM4 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC13.67□□□□□ -0.22
Trim63Q38HM4 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trim63Q38HM4 Gm37305-201ENSMUST00000195714 4279 ntBASIC13.67□□□□□ -0.22
Trim63Q38HM4 Ccdc166-201ENSMUST00000182172 2584 ntBASIC13.67□□□□□ -0.22
Trim63Q38HM4 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim63Q38HM4 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trim63Q38HM4 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC13.67□□□□□ -0.22
Trim63Q38HM4 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC13.67□□□□□ -0.22
Trim63Q38HM4 Gm45444-201ENSMUST00000211394 898 ntBASIC13.67□□□□□ -0.22
Trim63Q38HM4 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim63Q38HM4 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim63Q38HM4 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Trim63Q38HM4 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.67□□□□□ -0.22
Trim63Q38HM4 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim63Q38HM4 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Trim63Q38HM4 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim63Q38HM4 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trim63Q38HM4 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim63Q38HM4 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Trim63Q38HM4 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Trim63Q38HM4 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim63Q38HM4 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Trim63Q38HM4 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim63Q38HM4 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim63Q38HM4 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim63Q38HM4 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim63Q38HM4 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Trim63Q38HM4 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim63Q38HM4 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trim63Q38HM4 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim63Q38HM4 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim63Q38HM4 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim63Q38HM4 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC13.66□□□□□ -0.22
Trim63Q38HM4 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC13.66□□□□□ -0.22
Trim63Q38HM4 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim63Q38HM4 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim63Q38HM4 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim63Q38HM4 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trim63Q38HM4 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim63Q38HM4 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trim63Q38HM4 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms