Protein–RNA interactions for Protein: Q0VF58

Col19a1, Collagen alpha-1(XIX) chain, mousemouse

Predictions only

Length 1,136 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col19a1Q0VF58 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col19a1Q0VF58 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col19a1Q0VF58 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Col19a1Q0VF58 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col19a1Q0VF58 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col19a1Q0VF58 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col19a1Q0VF58 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col19a1Q0VF58 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col19a1Q0VF58 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Col19a1Q0VF58 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col19a1Q0VF58 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Col19a1Q0VF58 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC17.54■□□□□ 0.4
Col19a1Q0VF58 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC17.54■□□□□ 0.4
Col19a1Q0VF58 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Col19a1Q0VF58 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC17.54■□□□□ 0.4
Col19a1Q0VF58 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Col19a1Q0VF58 Gm4899-201ENSMUST00000178708 719 ntBASIC17.54■□□□□ 0.4
Col19a1Q0VF58 CT025535.1-201ENSMUST00000227172 491 ntBASIC17.54■□□□□ 0.4
Col19a1Q0VF58 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col19a1Q0VF58 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Col19a1Q0VF58 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Col19a1Q0VF58 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Col19a1Q0VF58 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Col19a1Q0VF58 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col19a1Q0VF58 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col19a1Q0VF58 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Col19a1Q0VF58 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col19a1Q0VF58 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Col19a1Q0VF58 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Col19a1Q0VF58 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col19a1Q0VF58 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.53■□□□□ 0.4
Col19a1Q0VF58 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col19a1Q0VF58 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC17.53■□□□□ 0.4
Col19a1Q0VF58 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC17.53■□□□□ 0.4
Col19a1Q0VF58 Mir7023-201ENSMUST00000185093 64 ntBASIC17.53■□□□□ 0.4
Col19a1Q0VF58 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col19a1Q0VF58 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col19a1Q0VF58 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Col19a1Q0VF58 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Col19a1Q0VF58 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col19a1Q0VF58 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.53■□□□□ 0.4
Col19a1Q0VF58 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col19a1Q0VF58 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col19a1Q0VF58 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col19a1Q0VF58 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col19a1Q0VF58 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col19a1Q0VF58 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Col19a1Q0VF58 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC17.52■□□□□ 0.4
Col19a1Q0VF58 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col19a1Q0VF58 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Col19a1Q0VF58 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC17.52■□□□□ 0.4
Col19a1Q0VF58 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.52■□□□□ 0.4
Col19a1Q0VF58 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col19a1Q0VF58 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Col19a1Q0VF58 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Col19a1Q0VF58 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC17.52■□□□□ 0.4
Col19a1Q0VF58 Mir1895-201ENSMUST00000122615 79 ntBASIC17.52■□□□□ 0.4
Col19a1Q0VF58 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
Col19a1Q0VF58 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Col19a1Q0VF58 Gm44335-201ENSMUST00000196879 141 ntBASIC17.52■□□□□ 0.4
Col19a1Q0VF58 Gm44297-201ENSMUST00000198304 141 ntBASIC17.52■□□□□ 0.4
Col19a1Q0VF58 Gm44346-201ENSMUST00000198851 141 ntBASIC17.52■□□□□ 0.4
Col19a1Q0VF58 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC17.52■□□□□ 0.4
Col19a1Q0VF58 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col19a1Q0VF58 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Col19a1Q0VF58 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Col19a1Q0VF58 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col19a1Q0VF58 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.52■□□□□ 0.4
Col19a1Q0VF58 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Col19a1Q0VF58 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Col19a1Q0VF58 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Col19a1Q0VF58 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC17.52■□□□□ 0.39
Col19a1Q0VF58 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col19a1Q0VF58 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col19a1Q0VF58 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col19a1Q0VF58 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col19a1Q0VF58 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col19a1Q0VF58 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC17.51■□□□□ 0.39
Col19a1Q0VF58 Gm5312-201ENSMUST00000203728 547 ntBASIC17.51■□□□□ 0.39
Col19a1Q0VF58 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC17.51■□□□□ 0.39
Col19a1Q0VF58 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Col19a1Q0VF58 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col19a1Q0VF58 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Col19a1Q0VF58 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col19a1Q0VF58 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Col19a1Q0VF58 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col19a1Q0VF58 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Col19a1Q0VF58 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col19a1Q0VF58 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col19a1Q0VF58 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Col19a1Q0VF58 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC17.5■□□□□ 0.39
Col19a1Q0VF58 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC17.5■□□□□ 0.39
Col19a1Q0VF58 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Col19a1Q0VF58 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC17.5■□□□□ 0.39
Col19a1Q0VF58 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Col19a1Q0VF58 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Col19a1Q0VF58 AC154572.2-201ENSMUST00000225105 997 ntBASIC17.5■□□□□ 0.39
Col19a1Q0VF58 AC140375.2-201ENSMUST00000225283 584 ntBASIC17.5■□□□□ 0.39
Col19a1Q0VF58 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.5■□□□□ 0.39
Col19a1Q0VF58 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms