Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ptchd3Q0EEE2 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ptchd3Q0EEE2 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
Ptchd3Q0EEE2 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ptchd3Q0EEE2 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ptchd3Q0EEE2 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC15.97■□□□□ 0.15
Ptchd3Q0EEE2 AC133083.1-201ENSMUST00000221736 2209 ntBASIC15.97■□□□□ 0.15
Ptchd3Q0EEE2 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Ptchd3Q0EEE2 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ptchd3Q0EEE2 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Ptchd3Q0EEE2 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Ptchd3Q0EEE2 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Ptchd3Q0EEE2 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ptchd3Q0EEE2 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ptchd3Q0EEE2 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ptchd3Q0EEE2 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC15.97■□□□□ 0.15
Ptchd3Q0EEE2 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Ptchd3Q0EEE2 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ptchd3Q0EEE2 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC15.96■□□□□ 0.15
Ptchd3Q0EEE2 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ptchd3Q0EEE2 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ptchd3Q0EEE2 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ptchd3Q0EEE2 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ptchd3Q0EEE2 Gm8520-201ENSMUST00000186517 868 ntBASIC15.96■□□□□ 0.15
Ptchd3Q0EEE2 Spcs1-207ENSMUST00000228767 1008 ntBASIC15.96■□□□□ 0.15
Ptchd3Q0EEE2 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ptchd3Q0EEE2 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Ptchd3Q0EEE2 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Ptchd3Q0EEE2 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Ptchd3Q0EEE2 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Ptchd3Q0EEE2 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ptchd3Q0EEE2 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Ptchd3Q0EEE2 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC15.95■□□□□ 0.14
Ptchd3Q0EEE2 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ptchd3Q0EEE2 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Ptchd3Q0EEE2 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ptchd3Q0EEE2 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ptchd3Q0EEE2 Gm16011-201ENSMUST00000121567 2662 ntBASIC15.95■□□□□ 0.14
Ptchd3Q0EEE2 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ptchd3Q0EEE2 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ptchd3Q0EEE2 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Ptchd3Q0EEE2 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ptchd3Q0EEE2 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ptchd3Q0EEE2 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ptchd3Q0EEE2 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ptchd3Q0EEE2 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Ptchd3Q0EEE2 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ptchd3Q0EEE2 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC15.95■□□□□ 0.14
Ptchd3Q0EEE2 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC15.95■□□□□ 0.14
Ptchd3Q0EEE2 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ptchd3Q0EEE2 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Ptchd3Q0EEE2 Gm10517-202ENSMUST00000192970 758 ntBASIC15.95■□□□□ 0.14
Ptchd3Q0EEE2 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
Ptchd3Q0EEE2 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ptchd3Q0EEE2 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC15.95■□□□□ 0.14
Ptchd3Q0EEE2 AL590614.2-201ENSMUST00000225374 1937 ntBASIC15.95■□□□□ 0.14
Ptchd3Q0EEE2 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ptchd3Q0EEE2 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ptchd3Q0EEE2 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ptchd3Q0EEE2 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ptchd3Q0EEE2 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ptchd3Q0EEE2 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ptchd3Q0EEE2 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ptchd3Q0EEE2 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ptchd3Q0EEE2 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Ptchd3Q0EEE2 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ptchd3Q0EEE2 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ptchd3Q0EEE2 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC15.95■□□□□ 0.14
Ptchd3Q0EEE2 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Ptchd3Q0EEE2 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ptchd3Q0EEE2 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
Ptchd3Q0EEE2 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC15.94■□□□□ 0.14
Ptchd3Q0EEE2 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Ptchd3Q0EEE2 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ptchd3Q0EEE2 AC124581.1-201ENSMUST00000225416 1399 ntBASIC15.94■□□□□ 0.14
Ptchd3Q0EEE2 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Ptchd3Q0EEE2 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ptchd3Q0EEE2 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ptchd3Q0EEE2 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ptchd3Q0EEE2 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Ptchd3Q0EEE2 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ptchd3Q0EEE2 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Ptchd3Q0EEE2 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ptchd3Q0EEE2 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Ptchd3Q0EEE2 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
Ptchd3Q0EEE2 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Ptchd3Q0EEE2 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ptchd3Q0EEE2 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Ptchd3Q0EEE2 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ptchd3Q0EEE2 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ptchd3Q0EEE2 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ptchd3Q0EEE2 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ptchd3Q0EEE2 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
Ptchd3Q0EEE2 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Ptchd3Q0EEE2 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Ptchd3Q0EEE2 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Ptchd3Q0EEE2 Gm4974-201ENSMUST00000209974 875 ntBASIC15.93■□□□□ 0.14
Ptchd3Q0EEE2 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Ptchd3Q0EEE2 AC112142.1-201ENSMUST00000228796 918 ntBASIC15.93■□□□□ 0.14
Ptchd3Q0EEE2 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms