Protein–RNA interactions for Protein: P97785

Gfra1, GDNF family receptor alpha-1, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfra1P97785 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Gfra1P97785 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Gfra1P97785 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Gfra1P97785 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Gfra1P97785 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Gfra1P97785 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Gfra1P97785 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Gfra1P97785 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Gfra1P97785 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC13.64□□□□□ -0.23
Gfra1P97785 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Gfra1P97785 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Gfra1P97785 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Gfra1P97785 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Gfra1P97785 Gm17807-201ENSMUST00000186869 298 ntBASIC13.64□□□□□ -0.23
Gfra1P97785 Gm29707-201ENSMUST00000196325 491 ntBASIC13.64□□□□□ -0.23
Gfra1P97785 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Gfra1P97785 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Gfra1P97785 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Gfra1P97785 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Gfra1P97785 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Gfra1P97785 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Gfra1P97785 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Gfra1P97785 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Gfra1P97785 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Gfra1P97785 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Gfra1P97785 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Gfra1P97785 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Gfra1P97785 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Gfra1P97785 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC13.64□□□□□ -0.23
Gfra1P97785 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Gfra1P97785 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Gfra1P97785 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gfra1P97785 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gfra1P97785 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Gfra1P97785 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Gfra1P97785 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gfra1P97785 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gfra1P97785 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gfra1P97785 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Gfra1P97785 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gfra1P97785 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Gfra1P97785 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Gfra1P97785 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC13.63□□□□□ -0.23
Gfra1P97785 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gfra1P97785 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Gfra1P97785 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gfra1P97785 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Gfra1P97785 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gfra1P97785 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gfra1P97785 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gfra1P97785 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC13.63□□□□□ -0.23
Gfra1P97785 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gfra1P97785 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gfra1P97785 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gfra1P97785 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gfra1P97785 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gfra1P97785 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Gfra1P97785 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Gfra1P97785 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC13.62□□□□□ -0.23
Gfra1P97785 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Gfra1P97785 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Gfra1P97785 Wnt10b-204ENSMUST00000226655 1807 ntBASIC13.62□□□□□ -0.23
Gfra1P97785 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gfra1P97785 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gfra1P97785 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gfra1P97785 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Gfra1P97785 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Gfra1P97785 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Gfra1P97785 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gfra1P97785 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gfra1P97785 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gfra1P97785 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Gfra1P97785 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC13.62□□□□□ -0.23
Gfra1P97785 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Gfra1P97785 Gm27742-201ENSMUST00000184667 60 ntBASIC13.62□□□□□ -0.23
Gfra1P97785 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Gfra1P97785 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gfra1P97785 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gfra1P97785 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC13.62□□□□□ -0.23
Gfra1P97785 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gfra1P97785 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
Gfra1P97785 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gfra1P97785 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gfra1P97785 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Gfra1P97785 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gfra1P97785 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gfra1P97785 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC13.61□□□□□ -0.23
Gfra1P97785 Gm15635-204ENSMUST00000208024 2539 ntBASIC13.61□□□□□ -0.23
Gfra1P97785 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC13.61□□□□□ -0.23
Gfra1P97785 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Gfra1P97785 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gfra1P97785 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gfra1P97785 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gfra1P97785 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Gfra1P97785 Gm44450-201ENSMUST00000199528 114 ntBASIC13.61□□□□□ -0.23
Gfra1P97785 Gm18421-201ENSMUST00000204122 625 ntBASIC13.61□□□□□ -0.23
Gfra1P97785 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC13.61□□□□□ -0.23
Gfra1P97785 AC159205.3-201ENSMUST00000224614 874 ntBASIC13.61□□□□□ -0.23
Gfra1P97785 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gfra1P97785 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms