Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Gm2399-201ENSMUST00000104944 225 ntBASIC16.39■□□□□ 0.21
Crnkl1P63154 Gm12896-201ENSMUST00000118430 226 ntBASIC16.39■□□□□ 0.21
Crnkl1P63154 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC16.39■□□□□ 0.21
Crnkl1P63154 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Crnkl1P63154 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Crnkl1P63154 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Crnkl1P63154 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Crnkl1P63154 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Crnkl1P63154 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Crnkl1P63154 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC16.39■□□□□ 0.21
Crnkl1P63154 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Crnkl1P63154 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Crnkl1P63154 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Crnkl1P63154 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Crnkl1P63154 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Crnkl1P63154 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Crnkl1P63154 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Crnkl1P63154 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Crnkl1P63154 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC16.38■□□□□ 0.21
Crnkl1P63154 Gm12527-201ENSMUST00000117967 564 ntBASIC16.38■□□□□ 0.21
Crnkl1P63154 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Crnkl1P63154 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC16.38■□□□□ 0.21
Crnkl1P63154 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC16.38■□□□□ 0.21
Crnkl1P63154 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Crnkl1P63154 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC16.38■□□□□ 0.21
Crnkl1P63154 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Crnkl1P63154 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Crnkl1P63154 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Crnkl1P63154 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC16.38■□□□□ 0.21
Crnkl1P63154 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Crnkl1P63154 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Crnkl1P63154 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Crnkl1P63154 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Crnkl1P63154 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Crnkl1P63154 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Crnkl1P63154 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Crnkl1P63154 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Crnkl1P63154 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC16.37■□□□□ 0.21
Crnkl1P63154 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Crnkl1P63154 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Crnkl1P63154 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Crnkl1P63154 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Crnkl1P63154 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Crnkl1P63154 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Crnkl1P63154 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Crnkl1P63154 Gm10418-201ENSMUST00000100943 576 ntBASIC16.37■□□□□ 0.21
Crnkl1P63154 Gm20760-201ENSMUST00000179197 648 ntBASIC16.37■□□□□ 0.21
Crnkl1P63154 Gm27011-201ENSMUST00000182352 972 ntBASIC16.37■□□□□ 0.21
Crnkl1P63154 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Crnkl1P63154 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Crnkl1P63154 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Crnkl1P63154 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Crnkl1P63154 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Crnkl1P63154 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Crnkl1P63154 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Crnkl1P63154 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Crnkl1P63154 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Crnkl1P63154 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Crnkl1P63154 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Crnkl1P63154 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Crnkl1P63154 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Crnkl1P63154 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Crnkl1P63154 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Crnkl1P63154 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Crnkl1P63154 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Crnkl1P63154 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Crnkl1P63154 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Crnkl1P63154 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Crnkl1P63154 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Crnkl1P63154 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Crnkl1P63154 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Crnkl1P63154 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Crnkl1P63154 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC16.36■□□□□ 0.21
Crnkl1P63154 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Crnkl1P63154 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC16.36■□□□□ 0.21
Crnkl1P63154 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Crnkl1P63154 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Crnkl1P63154 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Crnkl1P63154 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Crnkl1P63154 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Crnkl1P63154 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Crnkl1P63154 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Crnkl1P63154 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Crnkl1P63154 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Crnkl1P63154 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Crnkl1P63154 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Crnkl1P63154 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Crnkl1P63154 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Crnkl1P63154 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Crnkl1P63154 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Crnkl1P63154 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Crnkl1P63154 Gm10653-202ENSMUST00000139570 835 ntBASIC16.35■□□□□ 0.21
Crnkl1P63154 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC16.35■□□□□ 0.21
Crnkl1P63154 Trmt13-210ENSMUST00000198454 880 ntBASIC16.35■□□□□ 0.21
Crnkl1P63154 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Crnkl1P63154 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Crnkl1P63154 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Crnkl1P63154 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
Crnkl1P63154 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Crnkl1P63154 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms