Protein–RNA interactions for Protein: P62858

Rps28, 40S ribosomal protein S28, mousemouse

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rps28P62858 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Rps28P62858 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Rps28P62858 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC9.84□□□□□ -0.83
Rps28P62858 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Rps28P62858 Gm38058-201ENSMUST00000194323 4368 ntBASIC9.84□□□□□ -0.83
Rps28P62858 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Rps28P62858 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Rps28P62858 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Rps28P62858 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
Rps28P62858 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC9.83□□□□□ -0.84
Rps28P62858 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC9.83□□□□□ -0.84
Rps28P62858 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Rps28P62858 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Rps28P62858 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Rps28P62858 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Rps28P62858 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Rps28P62858 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Rps28P62858 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Rps28P62858 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Rps28P62858 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Rps28P62858 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Rps28P62858 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Rps28P62858 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Rps28P62858 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC9.83□□□□□ -0.84
Rps28P62858 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Rps28P62858 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Rps28P62858 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Rps28P62858 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Rps28P62858 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Rps28P62858 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Rps28P62858 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Rps28P62858 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Rps28P62858 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Rps28P62858 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Rps28P62858 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Rps28P62858 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Rps28P62858 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
Rps28P62858 Gm11620-201ENSMUST00000118770 1845 ntBASIC9.83□□□□□ -0.84
Rps28P62858 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC9.83□□□□□ -0.84
Rps28P62858 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
Rps28P62858 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Rps28P62858 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Rps28P62858 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Rps28P62858 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
Rps28P62858 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Rps28P62858 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Rps28P62858 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Rps28P62858 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Rps28P62858 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Rps28P62858 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Rps28P62858 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Rps28P62858 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
Rps28P62858 Sybu-209ENSMUST00000228639 4113 ntBASIC9.83□□□□□ -0.84
Rps28P62858 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
Rps28P62858 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
Rps28P62858 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Rps28P62858 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Rps28P62858 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Rps28P62858 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Rps28P62858 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC9.82□□□□□ -0.84
Rps28P62858 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Rps28P62858 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Rps28P62858 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Rps28P62858 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Rps28P62858 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC9.82□□□□□ -0.84
Rps28P62858 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Rps28P62858 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Rps28P62858 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Rps28P62858 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Rps28P62858 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Rps28P62858 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Rps28P62858 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Rps28P62858 Tgds-204ENSMUST00000228543 1594 ntBASIC9.82□□□□□ -0.84
Rps28P62858 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Rps28P62858 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Rps28P62858 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Rps28P62858 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Rps28P62858 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Rps28P62858 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC9.82□□□□□ -0.84
Rps28P62858 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC9.82□□□□□ -0.84
Rps28P62858 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Rps28P62858 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Rps28P62858 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC9.82□□□□□ -0.84
Rps28P62858 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Rps28P62858 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Rps28P62858 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC9.82□□□□□ -0.84
Rps28P62858 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Rps28P62858 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Rps28P62858 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Rps28P62858 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Rps28P62858 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Rps28P62858 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Rps28P62858 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Rps28P62858 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Rps28P62858 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Rps28P62858 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Rps28P62858 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Rps28P62858 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Rps28P62858 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Rps28P62858 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms