Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Cdh11P55288 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cdh11P55288 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cdh11P55288 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cdh11P55288 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cdh11P55288 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cdh11P55288 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
Cdh11P55288 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Cdh11P55288 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC15.06■□□□□ 0
Cdh11P55288 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Cdh11P55288 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Cdh11P55288 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cdh11P55288 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cdh11P55288 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Cdh11P55288 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC15.06■□□□□ 0
Cdh11P55288 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cdh11P55288 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cdh11P55288 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC15.06■□□□□ 0
Cdh11P55288 Gm12085-201ENSMUST00000119263 940 ntBASIC15.06■□□□□ 0
Cdh11P55288 Gm11539-201ENSMUST00000119837 557 ntBASIC15.06■□□□□ 0
Cdh11P55288 Gm13436-201ENSMUST00000120418 567 ntBASIC15.06■□□□□ 0
Cdh11P55288 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC15.06■□□□□ 0
Cdh11P55288 Gm9694-201ENSMUST00000193347 1189 ntBASIC15.06■□□□□ 0
Cdh11P55288 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC15.06■□□□□ 0
Cdh11P55288 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Cdh11P55288 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cdh11P55288 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC15.06■□□□□ 0
Cdh11P55288 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Cdh11P55288 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cdh11P55288 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cdh11P55288 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC15.06■□□□□ 0
Cdh11P55288 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cdh11P55288 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cdh11P55288 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Cdh11P55288 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC15.06■□□□□ 0
Cdh11P55288 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC15.06■□□□□ 0
Cdh11P55288 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Cdh11P55288 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cdh11P55288 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cdh11P55288 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cdh11P55288 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC15.06■□□□□ 0
Cdh11P55288 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ 0
Cdh11P55288 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Cdh11P55288 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Cdh11P55288 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Cdh11P55288 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC15.05■□□□□ 0
Cdh11P55288 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC15.05■□□□□ 0
Cdh11P55288 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Cdh11P55288 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC15.05■□□□□ 0
Cdh11P55288 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Cdh11P55288 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC15.05■□□□□ -0
Cdh11P55288 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC15.05■□□□□ -0
Cdh11P55288 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC15.05■□□□□ -0
Cdh11P55288 Gm8668-201ENSMUST00000120559 1447 ntBASIC15.05■□□□□ -0
Cdh11P55288 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cdh11P55288 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cdh11P55288 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC15.05■□□□□ -0
Cdh11P55288 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cdh11P55288 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cdh11P55288 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC15.05■□□□□ -0
Cdh11P55288 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC15.05■□□□□ -0
Cdh11P55288 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cdh11P55288 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Cdh11P55288 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC15.04■□□□□ -0
Cdh11P55288 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC15.04■□□□□ -0
Cdh11P55288 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC15.04■□□□□ -0
Cdh11P55288 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Cdh11P55288 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cdh11P55288 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cdh11P55288 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cdh11P55288 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
Cdh11P55288 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cdh11P55288 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cdh11P55288 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Cdh11P55288 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cdh11P55288 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cdh11P55288 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Cdh11P55288 Gm13559-201ENSMUST00000120476 863 ntBASIC15.04■□□□□ -0
Cdh11P55288 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC15.04■□□□□ -0
Cdh11P55288 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cdh11P55288 Gm7889-201ENSMUST00000185591 958 ntBASIC15.04■□□□□ -0
Cdh11P55288 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cdh11P55288 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC15.04■□□□□ -0
Cdh11P55288 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC15.04■□□□□ -0
Cdh11P55288 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cdh11P55288 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cdh11P55288 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC15.04■□□□□ -0
Cdh11P55288 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cdh11P55288 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cdh11P55288 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC15.04■□□□□ -0
Cdh11P55288 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Cdh11P55288 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Cdh11P55288 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Cdh11P55288 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cdh11P55288 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cdh11P55288 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Cdh11P55288 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cdh11P55288 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cdh11P55288 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Cdh11P55288 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms