Protein–RNA interactions for Protein: P51954

Nek1, Serine/threonine-protein kinase Nek1, mousemouse

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nek1P51954 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nek1P51954 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nek1P51954 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nek1P51954 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nek1P51954 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nek1P51954 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Nek1P51954 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nek1P51954 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Nek1P51954 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nek1P51954 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nek1P51954 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nek1P51954 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC18.4■□□□□ 0.54
Nek1P51954 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Nek1P51954 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Nek1P51954 Gm10013-201ENSMUST00000106074 672 ntBASIC18.4■□□□□ 0.54
Nek1P51954 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC18.4■□□□□ 0.54
Nek1P51954 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Nek1P51954 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Nek1P51954 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Nek1P51954 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nek1P51954 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nek1P51954 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Nek1P51954 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Nek1P51954 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Nek1P51954 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Nek1P51954 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Nek1P51954 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nek1P51954 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nek1P51954 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC18.39■□□□□ 0.53
Nek1P51954 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nek1P51954 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nek1P51954 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nek1P51954 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Nek1P51954 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nek1P51954 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nek1P51954 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Nek1P51954 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nek1P51954 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nek1P51954 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC18.39■□□□□ 0.53
Nek1P51954 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Nek1P51954 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC18.39■□□□□ 0.53
Nek1P51954 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC18.39■□□□□ 0.53
Nek1P51954 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
Nek1P51954 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nek1P51954 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Nek1P51954 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nek1P51954 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Nek1P51954 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC18.39■□□□□ 0.53
Nek1P51954 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Nek1P51954 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nek1P51954 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nek1P51954 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Nek1P51954 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Nek1P51954 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Nek1P51954 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nek1P51954 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nek1P51954 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Nek1P51954 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nek1P51954 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Nek1P51954 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nek1P51954 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Nek1P51954 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nek1P51954 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC18.38■□□□□ 0.53
Nek1P51954 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Nek1P51954 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC18.38■□□□□ 0.53
Nek1P51954 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Nek1P51954 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
Nek1P51954 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nek1P51954 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nek1P51954 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Nek1P51954 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Nek1P51954 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nek1P51954 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nek1P51954 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC18.37■□□□□ 0.53
Nek1P51954 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nek1P51954 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nek1P51954 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC18.37■□□□□ 0.53
Nek1P51954 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
Nek1P51954 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nek1P51954 Gm5421-201ENSMUST00000181698 2354 ntBASIC18.37■□□□□ 0.53
Nek1P51954 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Nek1P51954 Gm27463-201ENSMUST00000183569 57 ntBASIC18.37■□□□□ 0.53
Nek1P51954 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Nek1P51954 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nek1P51954 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nek1P51954 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nek1P51954 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nek1P51954 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nek1P51954 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nek1P51954 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nek1P51954 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nek1P51954 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nek1P51954 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC18.37■□□□□ 0.53
Nek1P51954 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nek1P51954 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nek1P51954 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nek1P51954 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nek1P51954 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC18.36■□□□□ 0.53
Nek1P51954 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nek1P51954 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 80.5 ms