Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SftpbP50405 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SftpbP50405 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SftpbP50405 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC16.92■□□□□ 0.3
SftpbP50405 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SftpbP50405 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SftpbP50405 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SftpbP50405 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SftpbP50405 Gm20760-201ENSMUST00000179197 648 ntBASIC16.92■□□□□ 0.3
SftpbP50405 Il3ra-202ENSMUST00000223589 738 ntBASIC16.92■□□□□ 0.3
SftpbP50405 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SftpbP50405 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SftpbP50405 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
SftpbP50405 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SftpbP50405 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SftpbP50405 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SftpbP50405 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SftpbP50405 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
SftpbP50405 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SftpbP50405 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SftpbP50405 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
SftpbP50405 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SftpbP50405 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SftpbP50405 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.91■□□□□ 0.3
SftpbP50405 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SftpbP50405 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SftpbP50405 Gm13168-201ENSMUST00000121771 632 ntBASIC16.91■□□□□ 0.3
SftpbP50405 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SftpbP50405 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC16.91■□□□□ 0.3
SftpbP50405 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SftpbP50405 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SftpbP50405 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
SftpbP50405 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
SftpbP50405 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SftpbP50405 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SftpbP50405 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SftpbP50405 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
SftpbP50405 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC16.9■□□□□ 0.3
SftpbP50405 Gm12669-201ENSMUST00000122162 1009 ntBASIC16.9■□□□□ 0.3
SftpbP50405 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC16.9■□□□□ 0.3
SftpbP50405 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SftpbP50405 Gm7791-201ENSMUST00000219066 539 ntBASIC16.9■□□□□ 0.3
SftpbP50405 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
SftpbP50405 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC16.9■□□□□ 0.3
SftpbP50405 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
SftpbP50405 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SftpbP50405 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SftpbP50405 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SftpbP50405 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC16.89■□□□□ 0.29
SftpbP50405 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SftpbP50405 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
SftpbP50405 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
SftpbP50405 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SftpbP50405 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SftpbP50405 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SftpbP50405 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
SftpbP50405 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SftpbP50405 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SftpbP50405 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC16.89■□□□□ 0.29
SftpbP50405 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SftpbP50405 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SftpbP50405 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SftpbP50405 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SftpbP50405 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC16.89■□□□□ 0.29
SftpbP50405 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SftpbP50405 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
SftpbP50405 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SftpbP50405 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC16.88■□□□□ 0.29
SftpbP50405 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SftpbP50405 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SftpbP50405 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
SftpbP50405 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SftpbP50405 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SftpbP50405 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SftpbP50405 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SftpbP50405 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SftpbP50405 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SftpbP50405 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
SftpbP50405 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SftpbP50405 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SftpbP50405 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
SftpbP50405 AC153881.1-201ENSMUST00000214448 284 ntBASIC16.88■□□□□ 0.29
SftpbP50405 Otx2os1-204ENSMUST00000227221 751 ntBASIC16.88■□□□□ 0.29
SftpbP50405 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
SftpbP50405 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SftpbP50405 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SftpbP50405 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SftpbP50405 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SftpbP50405 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
SftpbP50405 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SftpbP50405 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SftpbP50405 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SftpbP50405 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SftpbP50405 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SftpbP50405 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SftpbP50405 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SftpbP50405 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
SftpbP50405 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SftpbP50405 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SftpbP50405 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms