Protein–RNA interactions for Protein: P43407

Sdc2, Syndecan-2, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc2P43407 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC18.53■□□□□ 0.56
Sdc2P43407 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC18.53■□□□□ 0.56
Sdc2P43407 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sdc2P43407 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sdc2P43407 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Sdc2P43407 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sdc2P43407 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sdc2P43407 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sdc2P43407 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC18.53■□□□□ 0.56
Sdc2P43407 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sdc2P43407 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sdc2P43407 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Sdc2P43407 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sdc2P43407 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Sdc2P43407 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Sdc2P43407 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sdc2P43407 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sdc2P43407 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Sdc2P43407 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sdc2P43407 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC18.52■□□□□ 0.56
Sdc2P43407 Mir5122-201ENSMUST00000175004 89 ntBASIC18.52■□□□□ 0.56
Sdc2P43407 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sdc2P43407 Gm43353-201ENSMUST00000199224 1295 ntBASIC18.52■□□□□ 0.56
Sdc2P43407 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sdc2P43407 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sdc2P43407 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sdc2P43407 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sdc2P43407 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Sdc2P43407 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Sdc2P43407 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
Sdc2P43407 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Sdc2P43407 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC18.52■□□□□ 0.55
Sdc2P43407 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC18.51■□□□□ 0.55
Sdc2P43407 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sdc2P43407 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sdc2P43407 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Sdc2P43407 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sdc2P43407 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC18.51■□□□□ 0.55
Sdc2P43407 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sdc2P43407 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC18.51■□□□□ 0.55
Sdc2P43407 Gm27463-201ENSMUST00000183569 57 ntBASIC18.51■□□□□ 0.55
Sdc2P43407 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Sdc2P43407 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sdc2P43407 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Sdc2P43407 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Sdc2P43407 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Sdc2P43407 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sdc2P43407 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
Sdc2P43407 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sdc2P43407 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sdc2P43407 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Sdc2P43407 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sdc2P43407 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Sdc2P43407 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC18.5■□□□□ 0.55
Sdc2P43407 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC18.5■□□□□ 0.55
Sdc2P43407 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sdc2P43407 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sdc2P43407 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Sdc2P43407 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sdc2P43407 Gfra2-202ENSMUST00000227633 1480 ntBASIC18.5■□□□□ 0.55
Sdc2P43407 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Sdc2P43407 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sdc2P43407 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sdc2P43407 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
Sdc2P43407 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC18.5■□□□□ 0.55
Sdc2P43407 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sdc2P43407 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sdc2P43407 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Sdc2P43407 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Sdc2P43407 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sdc2P43407 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Sdc2P43407 Gm27011-201ENSMUST00000182352 972 ntBASIC18.49■□□□□ 0.55
Sdc2P43407 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Sdc2P43407 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sdc2P43407 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sdc2P43407 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC18.49■□□□□ 0.55
Sdc2P43407 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sdc2P43407 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sdc2P43407 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sdc2P43407 Dancr-204ENSMUST00000132389 2347 ntBASIC18.49■□□□□ 0.55
Sdc2P43407 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Sdc2P43407 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Sdc2P43407 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sdc2P43407 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sdc2P43407 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC18.48■□□□□ 0.55
Sdc2P43407 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC18.48■□□□□ 0.55
Sdc2P43407 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sdc2P43407 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Sdc2P43407 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sdc2P43407 Gm6190-201ENSMUST00000220683 1374 ntBASIC18.48■□□□□ 0.55
Sdc2P43407 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Sdc2P43407 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sdc2P43407 Gm4217-201ENSMUST00000182243 1002 ntBASIC18.48■□□□□ 0.55
Sdc2P43407 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC18.48■□□□□ 0.55
Sdc2P43407 AC135963.1-201ENSMUST00000211640 717 ntBASIC18.48■□□□□ 0.55
Sdc2P43407 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sdc2P43407 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC18.48■□□□□ 0.55
Sdc2P43407 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sdc2P43407 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Sdc2P43407 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms