Protein–RNA interactions for Protein: P43277

Hist1h1d, Histone H1.3, mousemouse

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1dP43277 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Hist1h1dP43277 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hist1h1dP43277 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hist1h1dP43277 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC13.99□□□□□ -0.17
Hist1h1dP43277 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hist1h1dP43277 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Hist1h1dP43277 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hist1h1dP43277 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hist1h1dP43277 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hist1h1dP43277 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Hist1h1dP43277 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hist1h1dP43277 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hist1h1dP43277 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Hist1h1dP43277 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hist1h1dP43277 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hist1h1dP43277 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hist1h1dP43277 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hist1h1dP43277 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hist1h1dP43277 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hist1h1dP43277 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Hist1h1dP43277 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC13.98□□□□□ -0.17
Hist1h1dP43277 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hist1h1dP43277 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hist1h1dP43277 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hist1h1dP43277 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hist1h1dP43277 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Hist1h1dP43277 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hist1h1dP43277 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Hist1h1dP43277 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Hist1h1dP43277 Gm15378-201ENSMUST00000121894 207 ntBASIC13.98□□□□□ -0.17
Hist1h1dP43277 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Hist1h1dP43277 Gm37856-201ENSMUST00000191634 999 ntBASIC13.98□□□□□ -0.17
Hist1h1dP43277 Gm5297-201ENSMUST00000198555 1171 ntBASIC13.98□□□□□ -0.17
Hist1h1dP43277 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC13.98□□□□□ -0.17
Hist1h1dP43277 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC13.98□□□□□ -0.17
Hist1h1dP43277 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hist1h1dP43277 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hist1h1dP43277 AC164629.5-201ENSMUST00000220387 632 ntBASIC13.98□□□□□ -0.17
Hist1h1dP43277 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hist1h1dP43277 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hist1h1dP43277 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hist1h1dP43277 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC13.98□□□□□ -0.17
Hist1h1dP43277 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hist1h1dP43277 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hist1h1dP43277 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC13.98□□□□□ -0.17
Hist1h1dP43277 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Hist1h1dP43277 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hist1h1dP43277 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hist1h1dP43277 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Hist1h1dP43277 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Hist1h1dP43277 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC13.98□□□□□ -0.17
Hist1h1dP43277 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hist1h1dP43277 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Hist1h1dP43277 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Hist1h1dP43277 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Hist1h1dP43277 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC13.98□□□□□ -0.17
Hist1h1dP43277 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Hist1h1dP43277 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hist1h1dP43277 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Hist1h1dP43277 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC13.97□□□□□ -0.17
Hist1h1dP43277 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Hist1h1dP43277 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hist1h1dP43277 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hist1h1dP43277 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Hist1h1dP43277 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hist1h1dP43277 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Hist1h1dP43277 Gm12085-201ENSMUST00000119263 940 ntBASIC13.97□□□□□ -0.17
Hist1h1dP43277 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC13.97□□□□□ -0.17
Hist1h1dP43277 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC13.97□□□□□ -0.17
Hist1h1dP43277 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hist1h1dP43277 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hist1h1dP43277 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hist1h1dP43277 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hist1h1dP43277 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hist1h1dP43277 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC13.97□□□□□ -0.17
Hist1h1dP43277 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hist1h1dP43277 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hist1h1dP43277 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hist1h1dP43277 Wnt10b-204ENSMUST00000226655 1807 ntBASIC13.97□□□□□ -0.17
Hist1h1dP43277 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hist1h1dP43277 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hist1h1dP43277 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hist1h1dP43277 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Hist1h1dP43277 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hist1h1dP43277 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC13.96□□□□□ -0.17
Hist1h1dP43277 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.17
Hist1h1dP43277 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hist1h1dP43277 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC13.96□□□□□ -0.17
Hist1h1dP43277 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Hist1h1dP43277 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hist1h1dP43277 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hist1h1dP43277 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hist1h1dP43277 Gm38027-201ENSMUST00000192315 235 ntBASIC13.96□□□□□ -0.17
Hist1h1dP43277 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Hist1h1dP43277 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
Hist1h1dP43277 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Hist1h1dP43277 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hist1h1dP43277 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Hist1h1dP43277 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Hist1h1dP43277 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms