Protein–RNA interactions for Protein: P43275

Hist1h1a, Histone H1.1, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1aP43275 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hist1h1aP43275 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hist1h1aP43275 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hist1h1aP43275 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hist1h1aP43275 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC13.65□□□□□ -0.22
Hist1h1aP43275 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hist1h1aP43275 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Hist1h1aP43275 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hist1h1aP43275 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
Hist1h1aP43275 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Hist1h1aP43275 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Hist1h1aP43275 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
Hist1h1aP43275 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC13.64□□□□□ -0.23
Hist1h1aP43275 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
Hist1h1aP43275 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hist1h1aP43275 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hist1h1aP43275 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hist1h1aP43275 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hist1h1aP43275 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Hist1h1aP43275 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hist1h1aP43275 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hist1h1aP43275 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Hist1h1aP43275 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Hist1h1aP43275 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hist1h1aP43275 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Hist1h1aP43275 Gm37856-201ENSMUST00000191634 999 ntBASIC13.64□□□□□ -0.23
Hist1h1aP43275 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC13.64□□□□□ -0.23
Hist1h1aP43275 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hist1h1aP43275 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Hist1h1aP43275 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hist1h1aP43275 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hist1h1aP43275 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hist1h1aP43275 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC13.64□□□□□ -0.23
Hist1h1aP43275 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Hist1h1aP43275 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hist1h1aP43275 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hist1h1aP43275 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hist1h1aP43275 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC13.63□□□□□ -0.23
Hist1h1aP43275 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hist1h1aP43275 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Hist1h1aP43275 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hist1h1aP43275 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Hist1h1aP43275 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hist1h1aP43275 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hist1h1aP43275 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Hist1h1aP43275 Gm44443-201ENSMUST00000204396 5633 ntBASIC13.63□□□□□ -0.23
Hist1h1aP43275 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Hist1h1aP43275 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hist1h1aP43275 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hist1h1aP43275 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Hist1h1aP43275 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hist1h1aP43275 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hist1h1aP43275 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hist1h1aP43275 Slc35b2-207ENSMUST00000226086 850 ntBASIC13.63□□□□□ -0.23
Hist1h1aP43275 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Hist1h1aP43275 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hist1h1aP43275 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
Hist1h1aP43275 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hist1h1aP43275 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hist1h1aP43275 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC13.63□□□□□ -0.23
Hist1h1aP43275 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hist1h1aP43275 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hist1h1aP43275 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hist1h1aP43275 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC13.63□□□□□ -0.23
Hist1h1aP43275 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hist1h1aP43275 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Hist1h1aP43275 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hist1h1aP43275 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hist1h1aP43275 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Hist1h1aP43275 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hist1h1aP43275 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hist1h1aP43275 AC124581.1-201ENSMUST00000225416 1399 ntBASIC13.62□□□□□ -0.23
Hist1h1aP43275 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hist1h1aP43275 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Hist1h1aP43275 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hist1h1aP43275 CT010444.2-201ENSMUST00000217877 1629 ntBASIC13.62□□□□□ -0.23
Hist1h1aP43275 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hist1h1aP43275 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hist1h1aP43275 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hist1h1aP43275 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC13.62□□□□□ -0.23
Hist1h1aP43275 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC13.62□□□□□ -0.23
Hist1h1aP43275 Gm37025-201ENSMUST00000195159 829 ntBASIC13.62□□□□□ -0.23
Hist1h1aP43275 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Hist1h1aP43275 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hist1h1aP43275 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hist1h1aP43275 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hist1h1aP43275 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hist1h1aP43275 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Hist1h1aP43275 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hist1h1aP43275 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hist1h1aP43275 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Hist1h1aP43275 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hist1h1aP43275 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC13.62□□□□□ -0.23
Hist1h1aP43275 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC13.61□□□□□ -0.23
Hist1h1aP43275 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hist1h1aP43275 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Hist1h1aP43275 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hist1h1aP43275 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Hist1h1aP43275 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
Hist1h1aP43275 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms