Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Abca1P41233 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Abca1P41233 Gm5828-201ENSMUST00000071842 1860 ntBASIC13.67□□□□□ -0.22
Abca1P41233 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Abca1P41233 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC13.67□□□□□ -0.22
Abca1P41233 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Abca1P41233 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Abca1P41233 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Abca1P41233 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC13.67□□□□□ -0.22
Abca1P41233 Gm13884-201ENSMUST00000118103 829 ntBASIC13.67□□□□□ -0.22
Abca1P41233 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Abca1P41233 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Abca1P41233 Mir5126-201ENSMUST00000175513 77 ntBASIC13.67□□□□□ -0.22
Abca1P41233 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Abca1P41233 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Abca1P41233 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Abca1P41233 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Abca1P41233 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Abca1P41233 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Abca1P41233 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Abca1P41233 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Abca1P41233 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Abca1P41233 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Abca1P41233 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Abca1P41233 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Abca1P41233 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Abca1P41233 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC13.66□□□□□ -0.22
Abca1P41233 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Abca1P41233 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Abca1P41233 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Abca1P41233 Gm7292-201ENSMUST00000194706 2527 ntBASIC13.66□□□□□ -0.22
Abca1P41233 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Abca1P41233 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC13.66□□□□□ -0.22
Abca1P41233 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Abca1P41233 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Abca1P41233 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Abca1P41233 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Abca1P41233 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Abca1P41233 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Abca1P41233 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Abca1P41233 Gm15372-201ENSMUST00000120729 834 ntBASIC13.66□□□□□ -0.22
Abca1P41233 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC13.66□□□□□ -0.22
Abca1P41233 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Abca1P41233 Gm43073-201ENSMUST00000198200 1189 ntBASIC13.66□□□□□ -0.22
Abca1P41233 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Abca1P41233 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Abca1P41233 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Abca1P41233 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Abca1P41233 Gm45141-201ENSMUST00000206502 1888 ntBASIC13.65□□□□□ -0.22
Abca1P41233 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Abca1P41233 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Abca1P41233 Gm12644-201ENSMUST00000119935 606 ntBASIC13.65□□□□□ -0.22
Abca1P41233 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Abca1P41233 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC13.65□□□□□ -0.22
Abca1P41233 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Abca1P41233 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Abca1P41233 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Abca1P41233 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Abca1P41233 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Abca1P41233 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Abca1P41233 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC13.65□□□□□ -0.22
Abca1P41233 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Abca1P41233 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Abca1P41233 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Abca1P41233 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Abca1P41233 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Abca1P41233 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Abca1P41233 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Abca1P41233 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Abca1P41233 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Abca1P41233 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Abca1P41233 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Abca1P41233 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Abca1P41233 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Abca1P41233 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
Abca1P41233 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Abca1P41233 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.23
Abca1P41233 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Abca1P41233 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Abca1P41233 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Abca1P41233 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC13.64□□□□□ -0.23
Abca1P41233 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Abca1P41233 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Abca1P41233 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC13.64□□□□□ -0.23
Abca1P41233 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Abca1P41233 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Abca1P41233 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Abca1P41233 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Abca1P41233 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC13.64□□□□□ -0.23
Abca1P41233 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC13.64□□□□□ -0.23
Abca1P41233 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Abca1P41233 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Abca1P41233 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Abca1P41233 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC13.64□□□□□ -0.23
Abca1P41233 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Abca1P41233 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Abca1P41233 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Abca1P41233 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Abca1P41233 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Abca1P41233 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms