Protein–RNA interactions for Protein: P35601

Rfc1, Replication factor C subunit 1, mousemouse

Predictions only

Length 1,131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc1P35601 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rfc1P35601 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rfc1P35601 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rfc1P35601 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rfc1P35601 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rfc1P35601 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rfc1P35601 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rfc1P35601 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rfc1P35601 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rfc1P35601 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rfc1P35601 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.44■□□□□ 0.38
Rfc1P35601 Flg-201ENSMUST00000050758 1488 ntBASIC17.44■□□□□ 0.38
Rfc1P35601 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rfc1P35601 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rfc1P35601 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Rfc1P35601 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rfc1P35601 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rfc1P35601 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.43■□□□□ 0.38
Rfc1P35601 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rfc1P35601 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rfc1P35601 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rfc1P35601 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Rfc1P35601 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC17.43■□□□□ 0.38
Rfc1P35601 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC17.43■□□□□ 0.38
Rfc1P35601 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rfc1P35601 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rfc1P35601 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
Rfc1P35601 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rfc1P35601 Gm10602-201ENSMUST00000098239 609 ntBASIC17.43■□□□□ 0.38
Rfc1P35601 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rfc1P35601 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rfc1P35601 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rfc1P35601 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rfc1P35601 Gm37912-201ENSMUST00000191895 3076 ntBASIC17.43■□□□□ 0.38
Rfc1P35601 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rfc1P35601 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rfc1P35601 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Rfc1P35601 Zkscan3-208ENSMUST00000224820 5398 ntBASIC17.43■□□□□ 0.38
Rfc1P35601 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rfc1P35601 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rfc1P35601 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rfc1P35601 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rfc1P35601 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rfc1P35601 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rfc1P35601 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rfc1P35601 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rfc1P35601 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rfc1P35601 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rfc1P35601 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rfc1P35601 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rfc1P35601 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.42■□□□□ 0.38
Rfc1P35601 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Rfc1P35601 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rfc1P35601 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.42■□□□□ 0.38
Rfc1P35601 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rfc1P35601 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Rfc1P35601 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rfc1P35601 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rfc1P35601 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rfc1P35601 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rfc1P35601 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rfc1P35601 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC17.42■□□□□ 0.38
Rfc1P35601 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC17.41■□□□□ 0.38
Rfc1P35601 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rfc1P35601 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rfc1P35601 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rfc1P35601 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC17.41■□□□□ 0.38
Rfc1P35601 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rfc1P35601 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rfc1P35601 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
Rfc1P35601 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Rfc1P35601 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC17.41■□□□□ 0.38
Rfc1P35601 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Rfc1P35601 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.41■□□□□ 0.38
Rfc1P35601 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rfc1P35601 Gm3807-201ENSMUST00000193520 1168 ntBASIC17.41■□□□□ 0.38
Rfc1P35601 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rfc1P35601 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Rfc1P35601 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rfc1P35601 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rfc1P35601 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC17.41■□□□□ 0.38
Rfc1P35601 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rfc1P35601 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rfc1P35601 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rfc1P35601 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rfc1P35601 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rfc1P35601 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Rfc1P35601 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rfc1P35601 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rfc1P35601 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC17.4■□□□□ 0.38
Rfc1P35601 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rfc1P35601 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rfc1P35601 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Rfc1P35601 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rfc1P35601 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Rfc1P35601 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rfc1P35601 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rfc1P35601 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC17.4■□□□□ 0.38
Rfc1P35601 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rfc1P35601 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms